KEGG   Apaloderma vittatum (bar-tailed trogon): 104281486
Entry
104281486         CDS       T08559                                 
Symbol
DDB1
Name
(RefSeq) LOW QUALITY PROTEIN: DNA damage-binding protein 1
  KO
K10610  DNA damage-binding protein 1
Organism
avit  Apaloderma vittatum (bar-tailed trogon)
Pathway
avit03420  Nucleotide excision repair
avit04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:avit00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    104281486 (DDB1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    104281486 (DDB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:avit04121]
    104281486 (DDB1)
   03400 DNA repair and recombination proteins [BR:avit03400]
    104281486 (DDB1)
Ubiquitin system [BR:avit04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     104281486 (DDB1)
DNA repair and recombination proteins [BR:avit03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      104281486 (DDB1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      104281486 (DDB1)
SSDB
Motif
Pfam: Beta-prop_RSE1_2nd CPSF_A Beta-prop_RSE1_1st Beta-prop_RIG_2nd
Other DBs
NCBI-GeneID: 104281486
NCBI-ProteinID: XP_009877796
LinkDB
Position
Unknown
AA seq 833 aa
TSIAECLTYLDNGVVFVGSRLGDSQLVKPNVDSNEQGSYVVAMETFTNLGPIVDMCVVDL
ERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDSHRETDNTLVL
SFVGQTRVLMLNGEEVEETELTGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALV
SEWKEPNGKNISVASCNSNQVVVAVGRALYYLEIRPQELRQISCTEMEHEVACLDITPLG
DTNGMSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALG
DGALFYFGLSLETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLV
FSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQ
EVSQCFGVLSSRIEVQDASGGTTALRPSASTQALSSSVSTSKLFSSSTAPHETSFGEEVE
VHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGR
IVVFHYSDGKLQSLAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELRTECNHYN
NIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLG
AENAFNLFVCQKDRXAAWEERXXXLQEVGLSHLGEFVNVFCHGSLVMQNLGETSTPTQGS
VLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATG
FIDGDLIESFLDISRPKMQEVVANLQIDDGSGMKREATVDDLIKIVEELTRIH
NT seq 2502 nt   +upstreamnt  +downstreamnt
acgtccatcgcagagtgtttgacctacctggacaacggagtcgtgtttgtcggctctcgg
cttggggattcccaactcgtcaagcccaacgtggacagcaacgagcagggctcctacgtg
gtggccatggagaccttcaccaacctcggtcccatcgtcgacatgtgtgtcgtagacctg
gaaagacaaggccaagggcagctggtcacctgctcgggggcatttaaagaaggttccctg
cggattattcggaacggcatcgggattcatgagcacgccagcatcgatttgccagggatt
aaaggcttgtggcccctgaggtcagactctcatcgcgaaacagacaatacgttggtgctg
tccttcgttggccagaccagggttcttatgttaaatggagaagaagtagaagagacggag
ctcacagggtttgtggacgatcagcagactttcttctgcggcaacgtggcgcatcagcag
ctgatccagatcacctctgcctccgtgagactcgttagccaggagcccaaagccctggtg
agcgagtggaaagagcccaacgggaagaacatcagcgtggcttcttgtaacagcaaccag
gtggtggtggctgtgggacgagccttgtactacctggagatccgaccgcaggagctcagg
cagatcagctgcacagaaatggagcatgaagttgcttgcctggacatcacgcctttgggg
gacactaatggcatgtccccgctctgcgccatcgggctctggaccgacatctccgcccgc
atcctgaagctgccttcctttgagctgctgcacaaagagatgctgggaggagaaattatc
cctcgctccatcctgatgacgactttcgagagcagccattaccttctgtgcgccctgggc
gacggggctctcttctacttcgggctcagcctcgagacaggcttgctgagtgaccgaaag
aaggtgacccttggcacccagcctactgtcctgaggacgttccgctccctgtccaccacc
aacgtgttcgcctgctcggaccgccccaccgtcatctacagcagtaaccacaaactggtc
ttctccaacgtcaacctgaaggaggtcaactacatgtgtcccctcaactcggatgggtat
cccgacagcttggcgttggccaataacagcaccctgacgatcggcaccatcgacgagatc
cagaagctgcacatccgcacggttcccctttacgaatcgcccaggaagatctgctaccaa
gaggtatcgcagtgtttcggcgtgctctcgagccgtatcgaggtgcaggatgccagcggt
ggcaccaccgcgctcagacccagtgccagcacccaggccctgtccagcagcgtgagcacc
agcaagctgttctccagcagcacggcgccgcacgagacctccttcggcgaggaggtggag
gttcacaacctgctcatcatagatcaacacaccttcgaagtgcttcacgctcaccagttc
ctgcagaacgaatacgccctcagcctggtctcctgcaagctcggcaaggacccaaacacc
tacttcatcgtgggcaccgccatggtctatcccgaggaggcagagcccaaacagggccgc
atcgttgtcttccactactccgacgggaagctgcagagcctggctgagaaggaggtcaag
ggggccgtgtattccatggtggaattcaacgggaagctcttagccagcatcaacagcacg
gtgcgtctctacgagtggacggcggagaaggagctgcgcacggagtgcaaccattacaac
aacatcatggctctctacctgaagaccaagggcgacttcatcctcgtgggagacctgatg
cgctccgtcctcctcctcgcctacaagcccatggaaggaaacttcgaggagattgcccgg
gactttaatccaaactggatgagcgctgtggagatcctggacgacgacaacttcttggga
gcggagaacgctttcaatttgttcgtttgccagaaggacaggtgagctgcctgggaggag
cgnnnnnnnnncttgcaggaggtggggctgtctcacctgggagagttcgtcaacgtcttc
tgtcacgggtctctggtcatgcagaacctgggggagacgtccacgccgacgcagggctcc
gttctcttcggcacggtcaacggcatgatcggactggtgacctcgctctcggagagctgg
tacaacctcctgctggacatgcagaacaggctcaataaagtcatcaagagcgtgggcaag
atcgaacactccttctggagatcgtttcacaccgagcgcaagacagaaccggctacgggc
ttcatcgacggtgacctgatcgaaagcttcctcgacatcagcaggcccaagatgcaggag
gtggtggcaaacttgcagatcgacgacggcagcggcatgaagagggaggccactgtagac
gacctgatcaagatcgtggaggagctgacccggatccattag

DBGET integrated database retrieval system