Acinetobacter vivianii: LF296_00830
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Entry
LF296_00830 CDS
T09059
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
aviv
Acinetobacter vivianii
Pathway
aviv03410
Base excision repair
aviv03430
Mismatch repair
aviv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aviv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LF296_00830 (recJ)
03430 Mismatch repair
LF296_00830 (recJ)
03440 Homologous recombination
LF296_00830 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aviv03400
]
LF296_00830 (recJ)
DNA repair and recombination proteins [BR:
aviv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LF296_00830 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LF296_00830 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LF296_00830 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
ETF
Motif
Other DBs
NCBI-ProteinID:
WDZ51390
UniProt:
A0AAJ6NJA2
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All DBs
Position
178730..180430
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AA seq
566 aa
AA seq
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MTQIQIQKRPLITRPEQFQGVPAFIAEILARRGVQSEQELELKLKHLLPPALKGLETAVE
LMDQAIDQQKQIVIVGDYDADGATSTTLMVLVLKEMGAKVDYLVPDRFKYGYGLTPAIAE
LAQQSYQPDLLITVDNGISSHAGVETAQALGMQVIITDHHLTTKPTPTAEAVVNPNQLGC
DFFSKALAGVGVAFYVLARLASLRTQQGKTTSKVTQYLDLVALGTYADVATLDYNNRILI
DAGLKRIQQHQCRAGILALLDIAGRDPASLRAQDLGFVVGPRINAAGRMESMRIGIECLL
AADMETAYPLAQQLNQLNIERRQVEGEMKQQAMQALQHIQLETTHLPAALVMFDEQWHQG
VIGIVAGRLKEQFHRPSLVFAPDEDGVHIKGSARSIEGIHIRDTIEQVAEQYPHLVSHFG
GHAAAAGLTLKKEHFDTFKTVFTQSIAEMDEDLFQATLWTDGELTDADLHLGTLDWIEQL
GPWGQKFPLPQFEGRFKVIDYRWLKELHLKLKLAVGPHSVDAIAFNAKDRFGFDPMLGYV
DLVYTLERNVFNGNTSLQLQIAHLKQ
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagattcaaattcaaaaaagaccattaattacacgccctgaacagtttcagggc
gtgcctgcttttattgctgaaattctggcaagacggggcgtgcaatcagaacaagagctt
gagctaaaactgaaacacttgttacctccagcactaaaaggcttggagacggcagttgag
ttgatggatcaggcgatcgatcaacaaaaacagattgtgattgtcggggattatgatgcg
gatggggcaaccagtactacattgatggtgctggttttaaaagaaatgggcgccaaagtg
gattatctggtgcctgaccgctttaaatacgggtatggactcactccagcaattgcagaa
ctggcccagcaaagttatcagcctgatcttttgattactgtggataatggtatttccagc
catgcaggcgtggaaacggcacaggcattggggatgcaggtgatcattaccgatcaccac
ttaaccactaaaccgacaccaactgctgaagcggttgtgaatccaaatcagctaggttgc
gactttttcagtaaagcactagctggggtaggcgtcgccttctatgtgctggctcgactg
gcaagtttacgtactcagcaaggtaaaacgaccagcaaggtcacgcagtatctggatttg
gtggcattgggaacctacgccgatgttgcgacactggactataataatcgtatcctgatt
gatgctggattgaagcggattcagcaacatcaatgtcgtgcgggcattttagctttactg
gatattgctggacgtgatcctgccagtctgcgagcacaagatttaggttttgttgtcggg
cctcgtattaatgccgcaggtcgcatggaaagcatgcgtatcgggatcgaatgtctgctt
gccgcagatatggaaacggcttatccacttgcccagcaattgaatcaattgaatatcgag
cgccgtcaggttgaaggtgagatgaagcaacaggccatgcaagccttgcaacatattcaa
ctggaaactacacatttgcctgctgcgctggtgatgtttgatgaacaatggcatcagggt
gtgatcggaattgttgcagggcgcttaaaggaacagtttcatcgtccgagtctggtgttt
gcacctgatgaagatggtgtacatatcaagggctcagcacgttcgattgaaggtattcat
attcgcgataccattgagcaggtggctgaacaatatcctcatctggtcagtcattttggt
ggtcatgccgcagcagcgggtttaaccctgaaaaaagaacattttgataccttcaaaacc
gtatttacccagtcaattgcagagatggatgaagatttatttcaggcgactttgtggacc
gacggtgagttgaccgatgccgatctgcatttaggcacgctggactggatcgagcaactg
gggccgtggggacaaaaatttccattaccgcaatttgaaggacgtttcaaagtcattgat
tatcgctggttgaaagagctgcacctgaaattgaaactggctgtcgggccgcattctgtg
gatgccattgcctttaatgcaaaagatcgttttggatttgatccgatgttgggctatgtc
gatctggtttatacgctggaacgtaatgtatttaatggcaataccagtctgcaattgcaa
atcgcccatttaaaacaataa
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