Acinetobacter vivianii: LF296_00940
Help
Entry
LF296_00940 CDS
T09059
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
aviv
Acinetobacter vivianii
Pathway
aviv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aviv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LF296_00940 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aviv03400
]
LF296_00940 (uvrA)
DNA repair and recombination proteins [BR:
aviv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LF296_00940 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LF296_00940 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
AAA_21
RsgA_GTPase
AAA_22
BCA_ABC_TP_C
AAA_25
AAA_23
DnaJ_CXXCXGXG
nSTAND3
AAA_33
NACHT
Viral_helicase1
AAA_24
cobW
Motif
Other DBs
NCBI-ProteinID:
WDZ51410
UniProt:
A0AAJ6P5F5
LinkDB
All DBs
Position
complement(204127..206958)
Genome browser
AA seq
943 aa
AA seq
DB search
MSQSHIRIRGARTHNLKNVSLDIPRDKFVVITGLSGSGKSSLAFDTLYAEGQRRYVESLS
AYARQFLSQMEKPEVDSIEGLSPAIAIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGTP
YCPEHDLPMVAQTISEMVDAVKSLEEGTALMLLAPVVRERKGEYTQLFEQLQGQGFVRAR
VDGEIIDIDTPPELDKKKKHTIEVVVDRFKVRDDLGNRIAESFETALRLGGDIAVLSWMN
GEHPERVFSAKHSCPECDRAVAELEPRLFSFNNPFGACPVCDGLGTRSHFSSDKLIPNPE
VSISQGAIRGWDRQRPYYYTMLQKVADHFGIDLDEPWNKLDKDTQKKFLQGTGKEKIDLS
YIDERGRKHSRVQAFEGILPHLERRYRETESNYVRDDLAQYLSNAACDACGGSRLNEISR
HVRVKDKTIAQITKMSIGDAENYYQDLNLEGAKGEIADKIFKEIRERLHFLVSVGLNYLS
LARSAETLSGGEAQRIRLASQIGAGLMGVMYVLDEPSIGLHQRDNDRLLQTLIRLRDLGN
TVLVVEHDEDAIRAADHIIDIGPGAGIHGGAVIAEGTYDELANHADSLTGQYLSGKLKIE
VPKQRTISPRPDEVIKLSGASGHNLQNVDLTIPLGIMTCVTGVSGSGKSTLINRTLLPLA
ATQLNGATTLTAEKFDSIDGLQHLDKVVDIDQSPIGRTPRSNPATYTGLFTPIRELFAQT
PEAKARGYSAGRFSFNVKGGRCEACEGDGMIKVAMHFLPDMYVPCDACHGKRYNRETLEV
GYKGKNISDVLEMTVEDAAEFFSAIPVIHRRLDTLTQVGLGYIRLGQAATTLSGGEAQRV
KLARELAKRDTGRTLYILDEPTTGLHFHDIAKLLDILYELRNKGNTIVVIEHNLDVIKTA
DWVIDLGPEGGSGGGQIIAEGTPEQVAKVEISHTGRFLKPMLK
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaaagtcatatccgtattcgaggcgcacgtactcataatttaaaaaatgtgtca
ctcgatatcccacgtgacaagtttgtggtgattacgggactttctggctcaggaaaatca
tccttggcctttgataccttgtatgccgaaggccagcgccgttatgtcgaatcactgtcg
gcttatgcgcgccaattcctgtcacaaatggaaaaaccagaagttgattcgattgaaggt
ttatcgcctgcaattgcaattgaacaaaaatcaacgagtcataacccacgttcgaccgtc
ggtaccattactgaaatttacgactatttgcgtttgctttacgcacgtgtgggtacgcct
tactgccctgaacatgatttaccaatggtggcacaaaccatttcagaaatggtcgatgcc
gttaaaagtctggaagaaggcactgctttgatgttgctggcgcctgtggtgcgtgagcgt
aaaggtgaatacacccaattatttgaacagttacaaggccaaggttttgttcgtgctcgt
gtcgatggtgaaatcattgatattgataccccgcctgaactggacaaaaagaaaaaacat
accattgaagtggtggtcgatcgctttaaagtccgtgatgatctcggtaaccgtattgca
gaatcgtttgaaaccgcattacgtctaggcggtgatattgcggttttatcatggatgaat
ggtgaacatccagagcgtgtgttttcggcaaaacattcttgtccagaatgtgaccgcgcc
gtagctgaacttgaaccacgtctgttctcattcaacaacccattcggtgcctgcccggtt
tgtgatggtttgggaacgcgcagccatttcagttcagataaactgattccaaatcctgag
gtttcaatcagccaaggcgcgattcgtggttgggatagacaacgcccgtattactacacc
atgctacaaaaagtcgcggatcatttcggtattgatctagatgagccgtggaataaactt
gataaagatacgcaaaagaaattcctgcaaggcacaggcaaagagaaaatcgacctcagt
tatatcgatgaacgtggtcgtaagcacagtcgtgttcaagcctttgaagggattttgccg
catctggaacgtcgctaccgcgaaactgaatcgaattatgtccgtgatgatctggcacaa
tatctgtcgaatgcagcatgtgatgcttgtggcggttcacgtctaaatgaaatttctcgt
catgttcgtgttaaagacaagaccattgctcaaatcaccaagatgtcgattggtgatgcg
gaaaactattatcaagacctgaatcttgaaggtgctaaaggtgaaatcgccgataaaatc
tttaaagagattcgtgaacgtttacactttctggtcagtgttggcctgaattatctcagt
ttggcacgttcagccgaaaccctttcaggtggtgaggcgcaacgtattcgtctggcttct
cagatcggcgcaggcttgatgggcgtgatgtatgtgctggatgaaccttcgattggtctg
catcaacgtgataatgatcgcttgttgcaaaccctgattcgcttgcgtgatttgggtaat
accgtattggtggttgagcatgatgaagatgccatccgtgctgctgaccatattattgat
atcgggccaggtgcgggtattcatggcggtgccgtgattgctgaaggaacttatgatgaa
ttggccaatcatgccgactcgcttacaggtcaatatctgtcaggtaaattgaagattgaa
gtaccgaaacaacgtacgatctcacctcgcccagatgaagtgatcaaactctctggtgcc
agcggacataacttacagaacgttgatctgactattccattgggcattatgacctgtgtg
actggggtgtcgggttctggtaaatcaacgctaatcaaccgtaccttattgcctttggct
gcgactcagctcaatggtgcaacaacgctgactgctgaaaagtttgactcgattgatggc
ttacagcatttagataaagtggttgatattgaccaaagtcctattggtcgtaccccacgt
tcaaaccctgcaacttatacgggtttattcacgccgattcgtgaattatttgctcagaca
cctgaggccaaagcgcgtggttatagcgcaggtcgtttctcgtttaacgtgaaaggtggt
cgctgtgaagcgtgtgaaggcgacggcatgatcaaagtcgcaatgcacttcttgccagat
atgtatgtgccttgtgatgcttgtcatggcaagcgttataaccgtgaaactttagaagtc
ggttataaaggcaagaatatttctgatgtcttggaaatgacggtggaagatgccgctgaa
ttctttagtgccattcctgtgattcatcgtcgtttagatactttgactcaagtcgggctt
ggctatatccgtttaggacaagcggcaacaacactttctggtggtgaagcgcaacgtgtg
aagctagcacgtgagttggcaaaacgcgatacgggtcgaaccttatatatcttggatgaa
ccgactacaggtctgcatttccatgatattgccaagttactcgacattttgtacgagcta
cgcaataagggtaataccatcgtggtgattgagcataatctagatgtgatcaagaccgct
gactgggtaattgatttaggccctgaaggtggttctggtggtggtcaaatcattgccgaa
ggtacacctgagcaagtggctaaagttgagatttcacatacaggtcgtttcttaaagccg
atgttgaagtga
DBGET
integrated database retrieval system