Acinetobacter vivianii: LF296_06595
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Entry
LF296_06595 CDS
T09059
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
aviv
Acinetobacter vivianii
Pathway
aviv02024
Quorum sensing
aviv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aviv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LF296_06595 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LF296_06595 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aviv03019
]
LF296_06595 (hfq)
03036 Chromosome and associated proteins [BR:
aviv03036
]
LF296_06595 (hfq)
Messenger RNA biogenesis [BR:
aviv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LF296_06595 (hfq)
Chromosome and associated proteins [BR:
aviv03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
LF296_06595 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
WDZ52439
UniProt:
N8W5Y7
LinkDB
All DBs
Position
1402284..1402799
Genome browser
AA seq
171 aa
AA seq
DB search
MSKGQTLQDPFLNSLRKERIPVSIFLVNGIKLQGHIESFDQYVVLLKNTVSQMVYKHAIS
TVVPARNPRPAGAQGAAGGFPAQGATGGFGGQGSTGGFGGQGGFGGQGGFGGQGGFGGQG
GFGGGQSGFGGQGGFGGQGGFGGQGGFGGGHQGGFDGETKFEDGQEDENNR
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaggtcaaactttacaagatccgttcttaaattctctccgtaaagaacgtatt
ccagtttctattttccttgtaaacggtatcaaattgcagggacacattgagtcatttgac
caatatgtcgttttattgaaaaacactgtaagccaaatggtttacaaacacgcgatttct
acagttgttcctgcgcgtaacccacgtccagctggtgctcaaggcgctgcaggtggcttc
ccagctcaaggcgcgactggcggcttcggtggtcaaggttctactggtggcttcggtggt
caaggtggcttcggtggtcaaggtggcttcggcggtcaaggtggcttcggcggtcaaggt
ggcttcggtggcggtcaaagcggcttcggtggtcaaggtggcttcggcggtcaaggtggc
ttcggtggtcaaggcggcttcggtggcggtcatcaaggtggcttcgatggcgaaactaaa
tttgaagatggtcaagaagacgaaaataatcgttaa
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