Acinetobacter vivianii: LF296_07115
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Entry
LF296_07115 CDS
T09059
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
aviv
Acinetobacter vivianii
Pathway
aviv03030
DNA replication
aviv03430
Mismatch repair
aviv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aviv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LF296_07115 (dnaE)
03430 Mismatch repair
LF296_07115 (dnaE)
03440 Homologous recombination
LF296_07115 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aviv03032
]
LF296_07115 (dnaE)
03400 DNA repair and recombination proteins [BR:
aviv03400
]
LF296_07115 (dnaE)
Enzymes [BR:
aviv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LF296_07115 (dnaE)
DNA replication proteins [BR:
aviv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LF296_07115 (dnaE)
DNA repair and recombination proteins [BR:
aviv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LF296_07115 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
WDZ52541
UniProt:
A0AAJ6NLG1
LinkDB
All DBs
Position
complement(1511530..1515093)
Genome browser
AA seq
1187 aa
AA seq
DB search
MRFVHLGIHTEFSITESIVRIPDLVKAAVKDEMPALALTDLSNLHAAVKFYEACLKKGIK
PVLGSVIRLNDAEHRATLLAMSNTGWRNLTEIVSRGFIEGQQLSIPCVQKEWVLEQAEDL
IVLLGQHSDVGKMLCSSNPQKAEPLLEAWIEKFGNRVYLALTRTERVGEEDFIQQAVKLA
AKYQIGVVAHNDVHFVEQIDFEAHEARVCIADGYVLGDDKRPKNYSPEQYFKTGEQMSEL
FSDIPSAIENTYHIARRCNVALQLGTYFLPDFPIPDGYTIDTYFEHLSREGLEERLNVLY
PITERDEDWAEIRKPYDERIKYEVDIILKMGFPGYFLIVMDFIQWAKNNGVPVGPGRGSG
AGSLVAYSLKITDLDPLRYDLLFERFLNPERVSMPDFDVDFCIAGRDRVIEYVAQNYGRQ
AVSQIATFGTMAAKGAIRDVARVLGKSYGLADRISKMVPTKPLGVDLATAIDMEPQLKDI
VTNPSNPDNDDAAEIWEMALKLEGITRNTGKHAGGVVIAPGKITDYSAVLCDADGTNRVA
QYDKDDVEAAGLVKFDFLGLRNLTVIEDAVQNINKRIKSEIPLNISNVPLDDKDAYLVFA
EANTTAVFQFESVGMKKMLKEARPSKFEEIIAFVSLYRPGPMDLIPDFIHRMHGGEFEYL
HPLLEGVLEPTYGIMVYQEQVMQAAQFCAGYTLGGADLLRRAMGKKKPEEMVKQRQIFIE
GAAKKDIDEATANHIFDYMEKFAGYGFNKSHAAAYALVAYHTAWLKAHYPAEFMAAVLSS
EMQNTDSIVFLIDDCRNNKLEVLPPSVNMSLYHFHASDEATIVYGLGAIKGVGEQAMQSV
IDSRINEGPYKDLFDFCHRIDLKKINKRTLEALIRAGALDCLGIERSSLMAQLPEAVQAA
EQARSNRETGIMDLFGEVEEVQRKPAKPVKPWSDEVRLKGEKDTLGLYLTGHPIDVYRPE
LKSFISAKLNELTPTRRGVTTVFAGLVVDIANFPNRIMITLDDGTARVEISCNHERFQRY
KEVVRLEQVVVIEGEIYEREGFDRPMARLSKAFSLNEIRQKRAQSIQVRLAQDLMSKTLA
KDLQAILLPYCNVDMCQHIGLQIQLEQSFATAELHLGPQWKVAPLDELLSKLRDYFGKEA
IAIEYQVKSKAAKVAEAPKVANIAPPPDNMSMDEALDLYQAEVSQYS
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgcggtttgttcatctcggtatccatacagagttttcgattacagaatcgattgttcgc
atacctgatttggtcaaggctgccgtaaaagatgagatgccagctctggcactcacagac
ttatccaacctgcatgcagcagtaaaattttacgaagcatgtctaaaaaaagggatcaag
cccgttttaggcagtgttattcgcctcaatgatgccgaacatcgcgccactttactggca
atgagcaatactggatggcgtaatctgactgaaatcgtatctcgcggttttatcgaaggc
caacagttaagtattccatgcgtacaaaaagaatgggtacttgaacaggctgaagacctg
attgtcttgctaggccaacatagtgatgtgggcaaaatgctctgctcttccaatccacaa
aaagctgaacctttactggaagcatggattgagaaatttggtaatcgcgtctatttggcc
ttaacgcgtactgaacgcgtaggcgaagaagattttatccagcaagccgtcaaattggcc
gccaaatatcagattggtgttgttgcccataatgatgtgcactttgttgaacaaatagat
tttgaggcccatgaggcccgcgtttgtattgctgatggttatgtacttggcgatgataaa
cgcccgaaaaactatagccctgaacaatattttaaaactggcgaacaaatgtctgagctg
ttttcagacattccgagtgcgattgaaaacacttaccatattgcaagacgttgtaatgtc
gcattacagctcggtacttatttcctacctgatttcccgattccagatgggtataccatc
gacacctatttcgagcatttgtctcgtgaaggcttagaagaacgcttaaatgttctttac
ccaatcactgaacgtgacgaagactgggccgagattcgcaaaccttatgatgagcggatc
aaatatgaagtcgatattattctcaagatgggattcccgggttacttccttattgtcatg
gacttcattcaatgggccaaaaataatggcgtgcctgttgggccgggtcgtggttcaggt
gcgggttcactggttgcgtatagcttaaaaattaccgatcttgacccattacgttatgac
ctactctttgaacgtttcttaaacccggaacgtgtctcgatgcccgactttgacgtcgac
ttctgtattgcaggtcgtgaccgtgtgattgaatatgttgcacagaattatggtcgtcaa
gcggtttcacagattgccaccttcggtaccatggcggcaaaaggtgcgattcgagatgta
gcccgtgtcttgggtaaatcctacggtctggctgaccgtatttctaaaatggttccaacc
aagccactgggtgtcgatctagcgaccgcgattgacatggaaccgcagctcaaagacatc
gtcaccaacccatccaatccagacaatgatgatgccgctgaaatctgggaaatggcactt
aagctagaaggtatcacgcgtaatacaggtaagcatgccggtggtgttgttattgcaccc
ggtaaaattaccgattactcagccgttctttgtgatgccgatggcaccaaccgcgtagca
caatatgataaagatgatgttgaagctgcgggcctggttaaattcgacttcttgggctta
cgtaacctgacggtgattgaagatgcggttcagaatatcaacaagcggatcaaatccgag
ataccactcaacatttccaatgttcctttagacgataaagatgcttatctggtgtttgct
gaggcaaataccactgcggtattccagtttgaatccgtcggcatgaaaaagatgttgaag
gaagcacgaccaagcaaatttgaagaaattattgccttcgtttccttgtatcgtccgggc
ccaatggatcttattcccgactttatccatcgtatgcatggcggtgagtttgagtatctt
catcccctgcttgaaggcgtattagaaccaacctacgggattatggtttaccaagaacag
gtaatgcaggctgcacagttctgtgcaggctatacactcggtggtgcggatttacttcgc
cgtgccatgggtaaaaagaaacctgaagaaatggtcaaacaacgccagatctttattgaa
ggtgcggcgaaaaaagatattgatgaagcaactgccaaccatatcttcgactatatggaa
aagtttgcaggctatggttttaacaaatctcatgccgcagcctatgcacttgttgcctac
cacaccgcttggttaaaagcgcattatcctgctgaatttatggcagccgtattatcttcg
gaaatgcagaataccgacagtatcgtgttcctgattgacgactgccgtaataacaagctg
gaagtgctaccaccgtctgtgaatatgtctttgtaccatttccatgccagcgatgaagca
accattgtgtatggtctaggtgcaattaaaggcgttggtgagcaagcgatgcaatcggtc
atcgactcacgcatcaatgaaggcccgtacaaggacttattcgacttctgtcatcgtatt
gatttgaaaaaaatcaataaacgtactttagaagccctgatccgtgcgggtgcgctggat
tgtctcggcattgaacgttcgagcttaatggcacaattgccagaagccgtacaagcagcc
gaacaagcgcgcagtaaccgtgaaacaggaattatggacttgtttggtgaagttgaagaa
gttcagcgtaaaccagccaaacctgtgaaaccttggtcagacgaagttcgtcttaaaggt
gaaaaagacacgctgggtctctacctcacaggtcacccgattgatgtctatcgcccagaa
ttaaaatcattcatttcagcaaaactgaatgagctgacaccgacacgtcgtggtgttacc
acggtttttgcaggtttagttgttgatattgccaacttcccaaaccgcattatgatcaca
ctggatgatggtacagcccgtgtcgagatcagttgcaaccatgagcgtttccagcgttac
aaagaagtggttcgcttagaacaagtcgttgtgattgaaggcgagatctacgaacgtgaa
ggctttgaccgtccaatggcacggttaagtaaggcattcagtttaaatgaaattcgccag
aaacgtgcccaaagtattcaggttcgcttagcgcaagacctgatgagcaaaactttagca
aaagatttacaagcgattcttttaccttattgtaatgttgatatgtgccagcatattggc
ctgcaaatccagcttgagcaaagttttgcaaccgccgagctacatctcggcccacaatgg
aaagttgcgccactggatgagttgctgagcaagttgcgggattattttggtaaagaagca
attgcgatcgaataccaagtgaaatctaaagcagccaaagttgcagaagcaccgaaagtg
gcaaacatcgcaccgccgcctgacaacatgtcaatggatgaagcgcttgatctctatcaa
gcagaagtctctcaatactcttaa
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