Acinetobacter vivianii: LF296_08125
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Entry
LF296_08125 CDS
T09059
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
aviv
Acinetobacter vivianii
Brite
KEGG Orthology (KO) [BR:
aviv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aviv03009
]
LF296_08125 (rimO)
Enzymes [BR:
aviv01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
LF296_08125 (rimO)
Ribosome biogenesis [BR:
aviv03009
]
Prokaryotic type
ribosomal protein modification factors
LF296_08125 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
YajR_YAM
TRAM
NTPase_1
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
WDZ52734
UniProt:
N9PXD9
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All DBs
Position
1723113..1724456
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AA seq
447 aa
AA seq
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MKTPKVGFVSLGCPKALVDSERILTQLKTEGYQVASDYDGADLVVVNTCGFIESAVQESL
DAIGEAMSENGRVIVTGCLGKDEDKIRQMHPNVLKVTGAAAYQDVMEAVHEYVPAPPKHN
PFIDLVPEQGVRLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGKVLDEAAALKR
AGVKEILVISQDTSAYGVDTKYKLDFWNGQPVKTKFYDMCEALGQLGIWVRLHYVYPYPH
VDAAIDLMAQGKILPYLDIPFQHASPRILKLMKRPAHSENTLERLKLWREKCPELVIRST
FVVGFPGETEEDFQILLEWLKEAQLDRVGCFTYSPVEGATANDLPDHVPEEIKQERYERF
MEVQQAISAAKLQKRIGQKMTVLVDSLEDEFPVAVARSYADAPEIDGNVFVEDIDKSVIK
AGDLLEVEITDADEYDLFAKLIQIKSA
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaagacccccaaagtcggttttgtatctttaggttgtcctaaggcattggtagattct
gaacgaattttaactcagttaaagactgaaggttatcaagttgcatcagattatgatggt
gcggatctggtagttgtaaatacctgtggttttattgaatctgcagtacaagagtcttta
gacgcgattggcgaagccatgagcgaaaatggccgagtcatcgttacaggctgtttaggt
aaagacgaagacaaaattcgccagatgcacccaaatgttcttaaagttacaggtgcagca
gcctatcaagatgtaatggaagcagtacatgaatatgtaccagcaccgccaaaacacaac
ccatttattgatttagtccctgagcaaggtgttcgtttaacaccgaagcattatgcttat
ttaaaaatctcggaaggctgtaatcaccgttgtacattctgcattatcccaagtatgcgt
ggcgaccttgtgtctcgtccggtcggaaaagtgctggatgaagctgctgcattaaaacgt
gccggtgtaaaagaaattctggtcatttctcaggatacctctgcttatggtgtagacacc
aaatataagctggatttctggaatggtcagcctgttaaaaccaaattctatgacatgtgt
gaagccctaggtcagttaggcatctgggtgcgtttacattacgtttatccatatccacat
gttgatgctgcgattgatttgatggcgcagggcaaaatcctgccatatttagatattcct
tttcagcatgccagtccgcgcatcttaaaattgatgaagcgaccagctcatagtgaaaat
accttagagcgccttaaattgtggcgtgaaaaatgccctgaattggtgattcgttcaaca
ttcgtggtgggtttcccgggtgaaactgaagaagatttccaaattttgctggaatggtta
aaagaagcgcagttagatcgtgtcggctgctttacctattcaccagttgaaggtgcaact
gcaaacgatcttcctgatcatgtgccagaagagatcaaacaagagcgttatgaacgcttc
atggaagtgcaacaagccatttcagcagcaaaactacaaaagcgtattggtcagaaaatg
actgtgctggttgatagtctggaagatgaattcccagttgctgttgcccgttcttatgca
gatgcgccagaaattgatggcaacgtttttgttgaagatatcgataagagcgtgattaaa
gcaggtgatttgcttgaagtcgaaattaccgatgcagatgaatacgatttatttgcaaag
ttaatccagattaaatctgcttga
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