Acinetobacter vivianii: LF296_08625
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Entry
LF296_08625 CDS
T09059
Name
(GenBank) HRDC domain-containing protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
aviv
Acinetobacter vivianii
Brite
KEGG Orthology (KO) [BR:
aviv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aviv03016
]
LF296_08625
Enzymes [BR:
aviv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
LF296_08625
Transfer RNA biogenesis [BR:
aviv03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LF296_08625
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
WDZ52828
UniProt:
A0AAJ6NLT5
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Position
1827117..1828259
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AA seq
380 aa
AA seq
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MFQFIQQQQDLAVLLSQMEQCSVYALDTEFIKVDTLYPKLGVCQINLNGQILLLDGAALD
LTSFWPKIFAAQQNIFHACGEDIDLIYHYADQKPLNNVFDTQIAMAFLGHGLQVSYQNAL
KTCLNIDIEKDQTRSDWLARPLSQEQMSYAANDVLYLTKLADTLKNDLKVKGLYQYVLED
CQNLTKEIAMETPLAELYTDIGNYRHSRRELMQLQQLSIWREQITKALNQPRSFILRNGT
MIDLVEKNPRNTFQLAKIKDIRPNVVREHGKTILDLLKFLPPENEWPLRMARPIKNNSKE
VAPKIDALIANVVLQTGIPKEVLLRKKWMNAIYEHVVFHLDEQNLPNYLMGWRYDILTQP
LIALLREDIDYLATQMKIAR
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgtttcagtttatccagcagcaacaagatttagctgttctcctaagccagatggaacag
tgttctgtctatgcacttgataccgaatttatcaaggtcgataccttatatccgaaactt
ggtgtttgccaaatcaatttaaatggccagattctgttactcgacggcgctgctttggac
ctgacaagtttttggccaaagatttttgcggcacaacagaatatttttcacgcctgcggt
gaagatattgatctgatctaccattatgcagatcaaaaaccgttaaataatgtgtttgat
acccagattgccatggcatttcttggacatggcttacaagtcagttatcagaatgcatta
aaaacctgtctcaatatcgatattgaaaaagaccagacacgctctgactggttggcaaga
ccattgtcgcaagagcaaatgagttatgcggcaaatgatgttttgtatctcaccaagctg
gcggatacattgaaaaatgatctgaaagtgaaggggctttatcaatacgtattggaagat
tgtcagaatctcaccaaagagattgcaatggaaacaccattggcagaactctatacggat
attggtaattaccgtcattcacgccgtgagttgatgcagctccagcagttgagtatctgg
cgagaacagattaccaaggcattgaatcagccgcgtagttttattctccgaaatggcacc
atgattgacctggtcgaaaagaatccgcgtaatacattccagcttgccaagattaaagat
atacgtccgaatgtggttcgtgagcatggtaaaaccattctggacttgctgaaatttttg
ccgcctgaaaatgaatggcctttacgtatggcacggccaatcaagaataattcaaaagaa
gttgccccgaagatagatgctttaattgcaaatgtagtgcttcagactggaatcccgaaa
gaagtgttgctacgcaagaaatggatgaatgcgatctatgagcatgtggtctttcatctg
gatgagcagaacttgccgaattatttaatgggctggcgttatgacattctgactcaacca
ttgattgcattgctgcgggaagatattgattatctggcaacacaaatgaaaattgcccgt
tag
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