Acinetobacter vivianii: LF296_13310
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Entry
LF296_13310 CDS
T09059
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K14159
ribonuclease HI / DNA polymerase III subunit epsilon [EC:
3.1.26.4
2.7.7.7
]
Organism
aviv
Acinetobacter vivianii
Pathway
aviv03030
DNA replication
aviv03430
Mismatch repair
aviv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aviv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LF296_13310 (dnaQ)
03430 Mismatch repair
LF296_13310 (dnaQ)
03440 Homologous recombination
LF296_13310 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aviv03032
]
LF296_13310 (dnaQ)
03400 DNA repair and recombination proteins [BR:
aviv03400
]
LF296_13310 (dnaQ)
Enzymes [BR:
aviv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LF296_13310 (dnaQ)
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
LF296_13310 (dnaQ)
DNA replication proteins [BR:
aviv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LF296_13310 (dnaQ)
RNase H
LF296_13310 (dnaQ)
DNA repair and recombination proteins [BR:
aviv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LF296_13310 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_H
RNase_T
RVT_3
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
WDZ50294
UniProt:
A0AAJ6NH42
LinkDB
All DBs
Position
2807630..2808982
Genome browser
AA seq
450 aa
AA seq
DB search
MSQTITLYVDGACKGNPGLGGWGAYVITEQGEHKLCGGEPQTTNNRMELQAAIEGVSFCP
VDAHLIIWTDSNYVKQGITEWIHGWKKKNWKDVKNPDLWQKLDAVCANRNIEWNWIKGHA
GHEGNEMADQLANLGAEQTAQQLKNTTQANADTKKPEADWLLNDPFGLDMDADVDDVEMI
EETENNVADEIETTEEMSPAPVVSSQHPHIVVTEAKLKLQGPRQLILDTETTGFYFQDGD
RIIEVGAIEMINRKLTGSSIHIYINPEKPVGDSENVHGISDDFLKDKPKYAEIADTLFAY
LKGAEIIAHNATFDMNFLDTEFKRVGLPPLSDVCEVTDTLALAKNKHPGQKNSLDALVRR
YEIPARDRTFHGALLDAEILADVYLAMTGGQVSFDMDALSQTEKNQNKITRQRVQVDLPI
IEPSEHELNEHETWVKQYEQKHGEPCLFAK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaacaattacgctttacgttgatggcgcatgcaaaggaaacccaggtctcggt
ggttggggtgcctatgtcattaccgaacaaggtgagcacaaactttgtggcggcgaacct
caaacaaccaataaccgcatggaactgcaagcagcaatcgaaggggtttccttttgtcct
gtagatgcccatctcattatctggacagattccaactatgtaaaacaaggcatcaccgaa
tggattcatggctggaaaaagaaaaactggaaagatgttaaaaatccagatttatggcaa
aaactggatgccgtctgtgccaaccgaaacattgagtggaactggatcaaaggtcatgcc
ggtcatgaaggtaatgaaatggctgaccaactggcaaatttaggtgcagaacaaacggct
caacaattaaaaaatacaacacaggctaacgctgatacaaaaaagcctgaagctgattgg
ctcttaaatgatccttttggcttagatatggatgcagacgtggatgatgttgagatgatc
gaagaaactgaaaataatgttgctgatgaaatcgagactacagaagaaatgtctccagca
cccgttgtttctagtcaacatccgcacattgttgtgactgaagcaaaattaaagctgcaa
ggcccacgtcagctcattctggatacagagactacaggtttttactttcaggatggcgat
cgtattattgaggtcggtgcgattgagatgatcaaccgtaaacttacgggcagctcgatt
catatttatatcaatccagaaaaaccagttggcgactctgaaaatgtccatggtattagc
gatgactttttaaaggacaaaccgaaatacgccgagattgccgatactttatttgcctat
ttaaaaggcgctgaaattatcgcgcataacgcaaccttcgatatgaacttccttgatacc
gagttcaaacgggttggcctaccgccactctcagacgtgtgtgaagtgaccgatacgctg
gcacttgccaagaacaagcaccctggacagaaaaattcattggatgcgctggttcgccgt
tacgaaattccggcacgagatcgtaccttccacggtgcattactcgatgctgagattctg
gctgatgtttatcttgccatgacgggtgggcaagtctcttttgatatggatgccctctct
cagaccgaaaaaaatcagaataaaataacacgtcaacgtgtgcaggttgatttacccatc
atcgaaccttcggaacatgaattaaatgaacatgagacttgggtcaaacaatacgagcaa
aaacatggagagccttgccttttcgcaaaataa
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