Alloalcanivorax venustensis: ACMG4O_09070
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Entry
ACMG4O_09070 CDS
T11689
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
avj Alloalcanivorax venustensis
Pathway
avj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
avj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACMG4O_09070 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avj03400
]
ACMG4O_09070 (uvrB)
DNA repair and recombination proteins [BR:
avj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACMG4O_09070 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACMG4O_09070 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
AAA_22
Kinesin
UB2H
DUF3295
Motif
Other DBs
NCBI-ProteinID:
XOC13881
LinkDB
All DBs
Position
1916194..1918209
Genome browser
AA seq
671 aa
AA seq
DB search
MSDTAFKLHSDYQPAGDQPTAIAGLIEGIGDGLGHQTLLGVTGSGKTFTMANVIQAIQRP
TIILAPNKTLAAQLYGEFKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHI
EQMRLSATKAILERRDTIIVATVSAIYGLGDPASYHAMVLHLVRGDHIDQRDLLRRLAEL
QYTRNEMDFRRATYRVRGDVIDIFPAEEEKEAVRIELFDDEIEDISIFDPLTGEVIKRVG
RITIYPKSHYVTPRDTVLAAIEMIKVELEERLKQLKDNNKLVEAQRLEQRTRFDIEMLQE
LGYCNGVENYSRLFSGRQPGEAPPTLFDYLPDDALLIVDESHVTIPQLGGMYKGDRSRKE
TLVEFGFRLPSAMDNRPLKFDEWERLAPQMVFVSATPGPYEEAHAGQVVEQVVRPTGLID
PALEVRPAGSQVDDLLGEVRECVEKGERVLVTTLTKRMAEDLTEYLNENGVKVRYLHSDI
DTVERVEIIRDLRLGKFDVLVGINLLREGLDMPEVALVAILDADKEGFLRSDRALIQTIG
RAARNLNGRAILYGDKITGSMRRAIDETERRREKQVQHNKEQGITPQGLKKMVRDIMDDA
YTTGAGQPERKRTRKVAEDKAPYVARSPAQVAKDIEKLEAEMMKHAKNLEFEQAAAVRDQ
IHKLREEGFMR
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacaccgcgttcaaactgcattccgactaccagccggccggcgaccagccgacc
gccatcgccggcctgatcgagggtatcggcgacggtctgggccaccagaccctgctcggg
gtgaccgggtccggcaagaccttcaccatggccaacgtgatccaggcgatccagcggccc
accattatcctggcgcccaacaagaccctggcggcccagctgtatggtgagttcaaggag
ttcttcccggagaatgcggtggagtacttcgtctcctattacgactactaccagccggaa
gcctacgtgcccagctcggacaccttcatcgagaaggacgcctcggtgaacgagcacatc
gagcagatgcggctgtccgccaccaaggcgattctggaacgccgcgacaccatcatcgtg
gccacggtgtcggcgatttacggcctcggcgacccggccagctaccacgccatggtgctg
cacctggtgcgcggcgaccacatcgaccagcgcgacctgctgcgccggctggcggagctg
cagtacacccgcaacgagatggatttccgccgcgccacctaccgggtgcgcggcgacgtg
atcgacatcttccccgccgaggaagagaaagaggcggtgcgcatcgagctgttcgacgac
gaaatcgaggacatcagcatcttcgacccgctcaccggcgaggtgatcaagcgggtgggg
cgcatcaccatctacccgaagagccattacgtgacgccccgggacacggtgctggcggcc
attgagatgatcaaggtggagctggaggagcgcctcaagcagctcaaggacaacaacaag
ctggtcgaggcgcagcggctggagcagcgcacccgcttcgacatcgagatgctgcaggaa
ctgggctactgcaacggcgtggagaactattcccggctgttttccgggcgtcagcccggc
gaggcgccgcccaccctgttcgattacctgcccgacgacgccctgctgatcgtggacgag
tcccacgtgaccattccgcagctgggcggcatgtacaagggcgatcgctcgcgcaaggaa
accctggtggagttcggcttccggctgccttcggcgatggacaaccggccgctgaagttc
gatgaatgggaacggctggcgccgcagatggtgttcgtgtccgccacgccgggcccctat
gaggaggcgcacgccggccaggtggtggagcaggtggtgcggcccaccggcctgatcgac
ccggccctggaagtgcgccccgccggcagccaggtggacgacctgctcggcgaagtgcgc
gaatgcgtggaaaaaggcgagcgggtgctggtcaccaccctgaccaagcggatggccgag
gaccttaccgagtacctcaatgagaacggcgtcaaggtgcgttacctgcactcggacatc
gacaccgtggagcgggtggagatcatccgcgacctgcggctgggcaagttcgacgtgctg
gtgggcatcaacctgctgcgcgagggcctggatatgcccgaggtggcgctggtggcgatc
ctggacgccgacaaggagggcttcctgcgctccgaccgcgccctgattcagaccatcggc
cgcgccgcgcggaacctcaacggccgggcgattctctacggcgacaagatcaccggctcc
atgcgccgcgccatcgacgagaccgagcgccgccgcgagaagcaggtgcagcacaacaag
gagcagggcatcacgccccagggcctgaagaagatggtccgcgacatcatggacgacgcc
tacaccaccggcgccggccagccggagcgcaagcgcacccgcaaggtggccgaggacaag
gccccctatgtggcccgctcaccggcgcaggtggccaaggacatcgagaagctggaagcg
gagatgatgaagcacgccaagaacctggagttcgagcaggccgcggcggtccgcgaccag
attcacaagctccgcgaagaaggcttcatgcgctag
DBGET
integrated database retrieval system
