Azotobacter vinelandii CA: AvCA_00030
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Entry
AvCA_00030 CDS
T02633
Symbol
recF
Name
(GenBank) recombination protein F
KO
K03629
DNA replication and repair protein RecF
Organism
avl
Azotobacter vinelandii CA
Pathway
avl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
avl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AvCA_00030 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avl03400
]
AvCA_00030 (recF)
DNA repair and recombination proteins [BR:
avl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AvCA_00030 (recF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
AAA_13
AAA_29
AAA_16
ABC_tran
AAA_27
ATPase_2
FXMR_C2
NACHT
AAA
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
AGK13091
LinkDB
All DBs
Position
2688..3785
Genome browser
AA seq
365 aa
AA seq
DB search
MSLGRVTVTAVRNLHPVTLNPSPRINILYGPNGSGKTSLLEAIHLLGLARSFRSQRLSPV
IQHEQPACTVFGQVLWNDGRVRNLGVARNRLGELQIRIDGQNVRSAAQLAESLPLQLINP
DSFRLLEGAPKVRRQFLDWGVFHVEQRFLPAWHRLQTALRQRNSWLRHGRIDPVSQAAWD
RELCLASEEIDSYRRSYIQVLKPVFESVLHELVELDGLTLSYYRGWDRERSLGEVLAASL
PRDQQLGHTQAGPQRADLRLRLAAHNAADLLSRGQQKLVVCALKIAQGHLVDRARRECIY
LVDDLPSELDEQHRRALCRLLEELHCQVFITCVDLEALREGWRTDTPVALFHVEQGRITQ
THDRE
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgtccctcggccgtgtgaccgtcaccgcggtgcgtaacctgcacccggtgaccctgaac
ccctcgccgcgcatcaacatactctacggcccgaacggcagcggcaagaccagcctactg
gaggcgatccacctgctcggcctggcgcgttcctttcgcagccagcgtctttcaccggtg
atccagcatgaacagccggcctgtacggtattcgggcaggtgctgtggaatgacggtcgg
gtacgcaatctcggtgtggcccgcaaccggctgggcgaactgcagattcgtattgatggg
cagaacgtgcgcagtgccgcgcagctcgccgagtccctgccgttgcaactgatcaatccg
gacagttttcggctgctcgagggagcgcccaaggtacgccgccagtttctcgactggggt
gtgttccacgtggaacaacgtttcctgccagcctggcatcgcctacagacggcgctgcgc
cagcggaactcctggctgcgccatggtagaatcgatccagtttcgcaagccgcctgggac
cgggaactgtgcctggcgagcgaggaaatcgacagttatcgacgcagctacattcaggtg
ctgaagccggtcttcgagagcgtcctgcatgagctggtggagctggacggtctgactctg
agctactaccgcggctgggaccgggagcgctcgctcggcgaggttcttgctgcttccctt
ccgcgcgatcagcaactggggcatacccaggccggcccgcagcgggccgatctgcgcctg
cgcctggccgcgcacaatgccgcggacttgctgtcgcgcggtcagcagaagctggtggtc
tgtgcgctgaagatcgcccaggggcatctcgtcgaccgcgccagacgcgagtgcatctat
ctggtcgacgacctgccctccgaactggatgaacagcaccggcgcgcgctgtgccgtctg
ctcgaagaattgcattgtcaggtgttcatcacctgcgtagaccttgaagcattgcgtgaa
ggctggcgcacggatacgccagttgccctgttccacgtggaacagggccgtatcacccag
acccacgatcgggagtga
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