Azotobacter vinelandii CA: AvCA_00630
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Entry
AvCA_00630 CDS
T02633
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
avl
Azotobacter vinelandii CA
Pathway
avl03030
DNA replication
avl03410
Base excision repair
avl03420
Nucleotide excision repair
avl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
avl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AvCA_00630 (polA)
03410 Base excision repair
AvCA_00630 (polA)
03420 Nucleotide excision repair
AvCA_00630 (polA)
03440 Homologous recombination
AvCA_00630 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
avl03032
]
AvCA_00630 (polA)
03400 DNA repair and recombination proteins [BR:
avl03400
]
AvCA_00630 (polA)
Enzymes [BR:
avl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AvCA_00630 (polA)
DNA replication proteins [BR:
avl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AvCA_00630 (polA)
DNA repair and recombination proteins [BR:
avl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AvCA_00630 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AvCA_00630 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
AGK12909
LinkDB
All DBs
Position
complement(65145..67871)
Genome browser
AA seq
908 aa
AA seq
DB search
MTQTPLVLVDGSSYLYRAFHALPPLATSGGTPTGAVKGVLNMLLALRKQYPDSPFAVVFD
AKGPTFRDELFEHYKSHRPPMPDDLRVQIEPLHACVRALGLPLLCVEGVEADDVIGTLAR
GSALDGRPVVISTGDKDMAQLVDGHITLVNTMTGSVLDHAGVAEKFGVGPELIIDYLALM
GDKVDNIPGVPGVGEKTALGLLQGLGGGLDTIYANLERVATLPIRGAKSLAAKLEEHREM
AYLSHRLATIKTDVALDIEIDALHPAAPDREALIALYRELEFKSWLDELLREAHAAGPTA
DPAAPGTHYETLLDRERFAAWLDKLKQAGLIAFDSETTSLDAQQAELVGLSFAVAPLEAA
YIPLAHSYMGVPDQLDRDAVLAALRPILEDPARAKVGQHAKYDMNVLAHYGIEVRGVAYD
TMLESYVLDSTATRHDMDSLALKYLGQGTIRFEDIAGKGAKQLTFDQIALEQAGPYAAED
ADVTLRLHQCLWQKLEAIPALAKVLKEIEMPLVPVLARIERHGALVDAKLLGEQSLELGE
KLQQLEREAHELAGEPFNLASPKQLGAILYDKLGLPVLSKTAKGQPSTAESVLADLAEQG
YPLPQVIMRHRSLNKLKGTYTDKLPQQINPRTGRIHTSYHQAVTATGRLSSSDPNLQNIP
IRTTEGRRIRQAFVAPEGYRLVAADYSQIELRIMAHLAQDTSLLHAFRNDLDVHRATAAE
VFGVAPEAVSADQRRSAKAINFGLIYGMSAFGLARQIGVERKEAQAYIDRYFARYPGVLA
YMERTRAQAAEQGYVETLFGRRLYLPEIHSKNGALRKAAERTAINAPMQGSAADIIKRAM
VTVDAWLLESGLDARMILQVHDELVLEVREDQVEALKAGLLPRMSGAAALDVPLLVEAGV
GGNWDEAH
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgacccagacccccctcgtcctggtggacggctcctcctatctgtaccgcgccttccat
gcgctgccgccgctggccacctccggcggcacgcccacgggggcggtgaagggtgtgctg
aacatgctgctggccctgcgcaagcaatatccggacagccccttcgcggtggtgttcgat
gccaaggggccgaccttccgcgacgagttgttcgagcactacaagtcgcaccgcccgccg
atgccggacgatctgcgggtgcagatcgagccgctgcacgcctgcgtgcgcgccctcggc
ctgccgctgttgtgcgtcgagggggtggaggcggacgatgtgatcggcaccctggcgcgc
ggcagcgcgctcgacggccggccggtggtgatctccaccggcgacaaggacatggcgcaa
ctggtcgacggccacatcaccctggtcaacaccatgaccggcagcgtgctggaccacgcc
ggagtggcggagaagttcggcgtcggccccgagctgatcatcgactacctggcgctgatg
ggcgacaaggtggacaacatccccggcgtgccgggagtcggcgagaagaccgcgctcggc
ctgctgcagggcctgggcggcggcctcgataccatctacgccaacctcgagcgggtggcg
acgctgccgatccgtggcgccaagtcgctggccgccaagctcgaggagcaccgcgagatg
gcctacctgtcccaccggctggcgaccatcaagaccgacgtggcgctggatatcgagatc
gacgcgctgcatccggccgcgccggaccgcgaggcgctgatcgccctctaccgcgaactg
gaattcaagagctggctggacgagctgctgcgcgaagcccatgccgccggccccacggcg
gacccggcggcgcccggcacgcactacgagacgctgctcgaccgggagcgcttcgcggcc
tggctggacaagctgaagcaggccgggctgatcgccttcgacagcgagaccaccagcctg
gacgcccagcaggcggaactggtcggcctgtcctttgccgtcgcacccttggaggcggcc
tacatcccgctggcgcacagctacatgggcgtgcccgaccagctcgaccgcgacgcggtg
ctcgccgcgctccggccgatcctggaagacccggccagggccaaggtcggccagcacgcc
aagtacgacatgaacgtgctggcgcattacggcatcgaggtgcgcggcgtggcctacgac
accatgctggagtcctacgtgctggattccacggcgacccgccacgacatggacagcctg
gcgctgaaatacctcggccagggcaccatccgcttcgaggacatcgccggcaagggcgcc
aagcaactgaccttcgaccagatcgccctggagcaggccggcccctacgccgccgaggac
gccgacgtgaccctgcgcctgcaccagtgcctgtggcagaagctcgaggccatcccggcg
ctggcgaaggtgctgaaagagatcgagatgccgctggtcccggtgctggcgcgcatcgag
cggcacggcgcgctggtcgacgccaagctgctcggcgagcagagcctggaactgggcgag
aagctgcagcagttggagcgcgaggcccacgagttggccggcgaacccttcaacctcgcc
tcgcccaagcagctcggcgccatcctctacgacaagctgggcctgccggtgctctccaag
accgccaagggccagccgtccaccgccgagagcgtgctcgccgacctggccgagcagggc
tatccgctgccccaggtgatcatgcgccaccgcagtctgaacaagctcaagggcacctac
accgacaaactgccgcagcagatcaacccacgcaccgggcgcatccacaccagctaccac
caggcggtgaccgccaccgggcggctgtcctcctcggacccgaacctgcagaacatcccg
atccgcaccaccgagggccgacgcatccgccaggccttcgtcgcgcccgagggctaccgg
ctggtggccgccgactattcgcagatcgaactgcgcatcatggcccacctggcccaggat
acgagcctcttgcacgccttccggaacgacctggacgtgcaccgggcgaccgccgccgag
gtgttcggcgtcgccccggaagcggtcagcgcggaccagcggcgcagcgccaaggcgatc
aacttcgggctgatctacggcatgagcgccttcggcctggccaggcagatcggcgtcgag
cgcaaggaggcgcaggcctacatcgaccgctacttcgctcgctatcccggcgtgctcgcc
tacatggagcgcacccgggcgcaggcggccgaacagggctacgtggagaccctgttcggt
cgccgcctgtacctgccggagatccactcgaagaacggcgccttgcgcaaggccgccgag
cgcaccgcgatcaacgcaccgatgcagggcagcgcggcggacatcatcaagcgcgccatg
gtgacggtggatgcctggctgctggagagcgggctggatgcgcggatgattctgcaggtg
cacgacgaactggtgctggaggtgcgcgaggatcaggtcgaggcgctcaaggccggcctg
ctgccgcgcatgagcggcgccgccgcgctggacgtgccgctgctggtcgaggccggggtc
ggcggcaactgggacgaggcgcactga
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