Azotobacter vinelandii CA: AvCA_05890
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Entry
AvCA_05890 CDS
T02633
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
avl
Azotobacter vinelandii CA
Pathway
avl03030
DNA replication
avl03430
Mismatch repair
avl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
avl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AvCA_05890
03430 Mismatch repair
AvCA_05890
03440 Homologous recombination
AvCA_05890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
avl03032
]
AvCA_05890
03400 DNA repair and recombination proteins [BR:
avl03400
]
AvCA_05890
Enzymes [BR:
avl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AvCA_05890
DNA replication proteins [BR:
avl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AvCA_05890
DNA repair and recombination proteins [BR:
avl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AvCA_05890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AGK17238
LinkDB
All DBs
Position
complement(568396..569118)
Genome browser
AA seq
240 aa
AA seq
DB search
MNPFAFLSSLGIDRPPLDDDQRRRLRRLPTAPHLDSRPLHAQRFVVLDLETTGLNVERDV
VLSIGAVLIENDAIDLSRQFECTLRRRLKSVTESVLIHGIAPSALAVGTAPAEALLRFME
YAGDCVFLAFHAPFDQRMLGRALKDELGYRLRHPFLDVADLAPMLFPEALVHPGGLDQWI
QYFGLDMSRRHHAAADALATAEIALILFNRARRTGLDNMAELGERAARWQRARRAVQHSL
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgaatccgttcgccttcctgtcttccctgggcatcgacaggccgccgctcgacgacgac
cagcggcgccgcctgcgccgcctgccgacggcgccgcacctggacagccgcccgctgcac
gcccagcgtttcgtggtgctcgacctggagaccaccggcctcaacgtcgagcgcgacgtc
gtcctgtcgatcggcgccgtgctcatcgagaacgacgccatcgacctctcccggcagttc
gagtgcaccctgcggcggcgcctgaaaagcgtgaccgaaagcgtgctgatccacggtatc
gcgcccagcgccctggccgtcggcaccgcgccggccgaagccttgctgcgcttcatggaa
tatgccggcgactgcgtgttcctcgccttccacgcccccttcgaccagcgcatgctgggc
cgcgcgctgaaggacgagctgggctacaggctgcgccaccccttcctcgacgtcgccgat
ctcgcacccatgctgttccccgaggccctcgtccatccgggcggcctggaccagtggata
cagtatttcggcctggacatgtcccggcgccaccacgctgcggccgacgccctggccacc
gccgaaatcgccctgatcctgttcaaccgcgcccggcgcacgggcctcgacaacatggcc
gaactgggcgagcgggccgcccgctggcagcgggcgcgccgcgcagtccagcactcgctt
tga
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