Azotobacter vinelandii CA: AvCA_11540
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Entry
AvCA_11540 CDS
T02633
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
avl
Azotobacter vinelandii CA
Brite
KEGG Orthology (KO) [BR:
avl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avl03400
]
AvCA_11540
DNA repair and recombination proteins [BR:
avl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AvCA_11540
Archaeal homologous recombinant proteins
AvCA_11540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
C2CH-4th_BIRD-IDD
FBPase_2
Metallophos_3
Motif
Other DBs
NCBI-ProteinID:
AGK13196
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Position
1104183..1105403
Genome browser
AA seq
406 aa
AA seq
DB search
MRLLHTSDWHLGQHFMGKTRQAEHRAFCDWLVERVREHAVDALIVAGDLFDSGAPPSHAR
EQYNRFIVALRATGARLVVLGGNHDSVAMLGESRGLLACLDTWVIPGVAADPAEQLLLLP
RRDGAPGALLCAIPFIRPRDVLKSEAGQSADAKLQALQAAIREHYRALFALAEARRRELG
GALPIVATGHLTTVGASASESVREIYVGSLEAFPTDAFPPAAYVALGHIHRPQQVAGLEH
IRYSGSPIPLSFDEARQCKEVLLVDLGEDGLEAVTPLPVPCFQPLLTLRGDLAELAGAVV
EAAAGGSAERPVWLEVRVVADEHLPDLPARVAALCAGLPVEVLRIRRERGDAVARLCREA
RETLDELSPEEVFEQRLAGAALDEALAGRLRGLHRQVLDELREERA
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctcctgcacacctccgactggcacctcggccagcacttcatgggcaagacccgc
caggccgagcaccgggccttctgcgactggctcgtcgagcgggtgcgcgagcacgcggtc
gacgcgctgatcgtcgccggcgacctgttcgacagcggcgcgccgcccagtcatgcccgc
gagcagtacaaccgcttcatcgtcgcgctgcgcgcgaccggcgcccgcctggtggtgctc
ggtggcaaccacgattcggtggccatgctcggcgagtcgcgcggtcttctggcctgcctg
gacacctgggtgattccgggcgtggcggcggacccggccgagcagctcctgctgttgccg
cggcgcgacggtgcgccgggcgcgttgctctgcgccatccccttcatccgtccgcgcgac
gtgctgaaaagcgaggccgggcagagcgcggacgccaagctgcaggcgctgcaggcggcg
atccgcgaacactaccgggcgctgttcgccctcgccgaggcgcgtcgccgcgagctgggc
ggcgccctgccgatcgtcgccacggggcacctgaccaccgtcggcgccagtgccagcgaa
tcggtgcgggagatctacgtcggcagcctggaggctttcccgaccgatgccttcccgccg
gcggcctatgtcgccctcggccatatccatcgcccgcagcaggtcgccgggctggagcac
atccgctacagcggctcgccgatcccgctgtccttcgacgaggcgcgccagtgcaaggag
gtgttgctggtcgacctgggcgaggacggcctcgaggcggtgacgccgctgccagtgccc
tgtttccagccgctgctcacgctgcgcggcgatctcgccgagctggccggcgccgttgtc
gaggcggccgccgggggtagcgccgagcgtccggtgtggctggaggtccgggtcgtcgcc
gacgagcacctgcccgacctgccggcgcgcgtcgccgccctttgcgcggggctgccggtg
gaggtgctgcgcatccgccgcgagcgcggcgacgcagtcgcccgcctgtgccgcgaggca
cgggaaaccctcgacgaactgagccccgaggaggtgttcgaacagcgcctggccggcgcg
gcactggacgaggcgctggccgggcgcctgcgcggcctgcaccgccaggtgctcgacgag
ctgcgcgaggagcgggcgtga
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