Azotobacter vinelandii CA: AvCA_13230
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Entry
AvCA_13230 CDS
T02633
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
avl
Azotobacter vinelandii CA
Pathway
avl00470
D-Amino acid metabolism
avl00550
Peptidoglycan biosynthesis
avl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
avl00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AvCA_13230 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AvCA_13230 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
avl01011
]
AvCA_13230 (murD)
Enzymes [BR:
avl01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
AvCA_13230 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
avl01011
]
Precursor biosynthesis
Amino acid ligase
AvCA_13230 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
TrkA_N
NAD_binding_8
FAD_binding_3
XdhC_C
Motif
Other DBs
NCBI-ProteinID:
AGK13175
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Position
1286428..1287774
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AA seq
448 aa
AA seq
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MSLIASDQFRIVVGLGKSGMSLVRFLARQGARFAVVDTRANPPELATLKAQFPQVEVRCG
ELDVEFLCRASELYVSPGLALSTPALQAAAARGVRLSGDIELFARYARAPIVAITGSNAK
STVTTLVGEMARAAGRRVAVGGNLGTPALDLLDDGIELYVLELSSFQLETTERLNAEVAT
CLNVSEDHMDRYADLQAYHLAKHRIFRGARQVVVNRDDALSRPLVADRLPCWTFGLGKPD
FKGFGLLEENGEKCLAFQFETLMPVRELKIRGAHNQANALAAMALGHAVGLPFAPMLETL
KRFAGLPHRCQWLRDVREVGYYDDSKATNVGAALAAIEGLGADIAGKLVLIAGGDGKGAD
FSSLRRPVAEHCRAVVLLGRDAGRIAVVLDGAVPLVRVGTLEEAVERSASLAEAGDAVLL
SPACASLDMFRNFEERGRLFAQAVGGLS
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgatcgcttccgaccaattccgcatcgtcgtcggtctcggcaagagcggcatg
tccctggtgcgcttcctggcccgccagggcgcgcggttcgccgtggtcgacacccgcgcc
aatcctccggagctggccaccttgaaggcacagttcccgcaggtcgaagtgcgttgcggt
gagttggacgtggaattcctctgccgcgccagcgagctttacgtcagtcctggcctggct
ctgtccacgccggcattgcaggccgcagccgcgcgcggagtgaggttgtccggcgacatc
gagttgttcgcccggtacgccagggcgccgatcgtcgccattaccggctccaacgccaag
agcacggtgaccaccctggttggcgagatggcccgggcggccgggcggcgtgtggcggtg
ggcggcaatctgggtactccggccctcgacctgctggacgatggcatcgagttgtatgtg
ctggagttgtccagcttccagttggagaccaccgaacggctgaatgccgaggtcgccacc
tgtctcaacgtcagtgaagaccacatggatcgctatgccgacctgcaggcctatcacctg
gccaagcaccgcatcttccgcggcgcacgccaggtggtggtgaaccgggacgatgccttg
tcccggccgctggtcgccgaccggctaccatgctggaccttcggcctcggcaagccggat
ttcaaggggttcggtctgctggaggagaacggcgagaaatgcctggccttccagttcgag
acgctcatgccggtccgcgaactgaagattcgcggtgcccacaaccaggccaatgccctg
gcggcaatggccctggggcacgcggttggcttgccgttcgcgccgatgctggagactctg
aagcgcttcgccggattgccccaccgttgccagtggctgcgggacgtgcgtgaagtgggg
tattacgatgactccaaggcaaccaatgtcggtgccgcgctggcagcgatcgaggggctg
ggggcggatatcgccggcaagctggtgctgatcgccggtggcgatggcaagggggcggat
ttctccagtcttcgtcggccggtcgctgagcactgccgtgccgtagtgttgctcgggcgc
gatgccgggcgcatcgccgtggtgctggatggcgccgtaccgctggtccgggtcgggacg
ttggaggaggcggtcgagcgttcggcttccctggccgaggcgggcgatgccgtgctgctg
tcgccggcctgcgccagcctggatatgttccgaaacttcgaagagcgtggacgcctgttc
gcccaagcggtgggagggctctcctga
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