Azotobacter vinelandii CA: AvCA_14470
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Entry
AvCA_14470 CDS
T02633
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
avl
Azotobacter vinelandii CA
Brite
KEGG Orthology (KO) [BR:
avl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
avl03032
]
AvCA_14470 (topA)
03400 DNA repair and recombination proteins [BR:
avl03400
]
AvCA_14470 (topA)
Enzymes [BR:
avl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AvCA_14470 (topA)
DNA replication proteins [BR:
avl03032
]
Prokaryotic type
DNA Topoisomerases
AvCA_14470 (topA)
DNA repair and recombination proteins [BR:
avl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AvCA_14470 (topA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Toprim_4
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
AGK12538
LinkDB
All DBs
Position
1427414..1430020
Genome browser
AA seq
868 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGSQYVVKSSIGHIRDLPTSGSASTAKEPAKRGKGVAEGP
ALSPRDKAKRQLFARMGVDPEHGWQAHYEILPGKEKVVDELRRLAREADTIYLATDLDRE
GEAIAWHLRESIGGDEERYKRVVFNEITKKAIQEAFSQPGDLDINRVNAQQARRFLDRVV
GYMVSPLLWQKIARGLSAGRVQSVAVKLIVEREREIRAFIPEEFWEVHADLGTARGDKVR
FEVAREQGEVFRPLNEAQAMAALEKLKASSYQVLKREDKPTRSKPSAPFITSTLQQAASN
RLGFSVKKTMMMAQRLYEAGYITYMRTDSTNLSADALEMARGFIDSEFGGKYLPAKPNVY
TSKEGAQEAHEAIRPSDVNLRPNQLAGMERDAERLYELIWRQFVACQMPPAEYLSTNVSV
QAGDFELRAKGRILKFDGYTRVLPQLAKPGEDDVLPEMSEGELLDLLKLDPSQHFTKPPA
RYSEASLVKEMEKRGIGRPSTYAAIISTIQERGYVTLQNRRFHSEKMGEIVTERLGESFA
NLMDYGFTASMEEHLDDVAQGERDWKNLLDEFYGDFRRKLEAAESSEAGMRANQPTLTDI
PCRECGRPMMIRTASTGVFLGCSGYNLPPKERCKATVNLIPGDEIAADDEGESESLLLRH
KRRCPKCGTAMDAYLLDERHKLHICGNNPDCPGYEIEEGQYRIKGYEGPTLECDKCGSEM
QLKTGRFGKFFGCTNAACKNTRKLLKNGEPAPPKMDAVKMPELRCEKVDDVYVLRDGASG
LFLAASQFPKNRETRAPLVLELLPHRDEIDPKYHFLLEAPSHDPEGRPAVIRFSRKTKEQ
YVQSEVEGKPSGWRAFHRDGRWVVEDKH
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaatcgctggtcatcgtggaatccccggccaaggccaagaccatcaacaagtat
ctgggcagccagtacgtggtgaagtcgagcatcggccatatccgtgacctgcccaccagc
ggctcggccagtaccgccaaggagccggccaagcgcggcaagggcgtggccgaagggccg
gcgttgtcgcccagggacaaggccaagcgtcagttgttcgcgcgcatgggggtcgatccc
gagcacggctggcaggcccattacgaaatcctgccgggcaaggaaaaggtggtcgacgag
ttgcgccgcctggcccgggaagccgacaccatctatctcgccaccgacctggaccgcgaa
ggggaggccatcgcctggcacctgcgcgaatccatcggcggcgacgaggagcgctacaag
cgcgtggtgttcaacgaaatcaccaagaaggcgatccaggaggctttctcccagccgggc
gacctggatatcaaccgggtcaacgcgcagcaggcgcggcgcttcctcgaccgggtggtc
ggctacatggtttcgccgctgctctggcagaagatcgctcgcggcctgtccgccggccgc
gtgcagtcggtggcggtgaagctgatcgtcgagcgcgagcgggagatccgcgccttcatc
ccggaggagttctgggaggtgcatgccgacctgggcaccgcccgcggcgacaaggtgcgc
ttcgaggtggccagggagcagggcgaggtcttccgcccgctcaacgaggcccaggccatg
gccgcgctggagaagctcaaggcctccagctaccaggtgctcaagcgcgaggacaagccg
acccgcagcaagccctcggcgcccttcatcacctcgaccttgcagcaggcggcgagcaac
cgcctcggcttctcggtgaagaagaccatgatgatggctcagcgcctgtacgaggccggt
tacatcacctacatgcggaccgactcgaccaacctctccgccgatgccctggagatggcg
cgcggcttcatcgacagcgagttcggcgggaagtacctgccggccaagcccaatgtctac
accagcaaggaaggcgcccaggaggctcacgaggcgatccgtccctccgacgtcaacctg
cggccgaaccagttggccggcatggagcgcgacgccgagcgcctctacgagctgatctgg
cgccagttcgtcgcctgccagatgccgccggccgaatacctgtcgaccaacgtcagcgtc
caggccggcgacttcgagctgcgcgccaagggccgcatcctcaagttcgacggctatacc
cgcgtgttgccgcaattggccaagcccggcgaggacgacgtgctgccggagatgagcgag
ggcgaactgctcgatctgctcaagctcgatcccagccagcatttcaccaagccgccagcg
cgctacagcgaggccagcctggtcaaggagatggaaaagcgcgggatcggccggccgtcc
acctacgcggcgatcatctcgaccatccaggagcgcggctacgtgaccctgcagaatcgc
cgcttccattcggagaagatgggcgagatcgtcaccgagcggctcggcgagagcttcgcc
aacctgatggactacggcttcaccgctagcatggaggagcatctggacgacgtcgcccag
ggcgagcgcgactggaagaacctgctcgacgagttctacggcgatttccgcaggaagctg
gaggcggccgaatccagcgaggccggcatgcgcgccaaccagccgaccctgaccgacatt
ccctgccgcgaatgcggccggccgatgatgatccgcaccgcctcgaccggcgtgttcctc
ggctgctcgggttacaacctgccgcccaaggaacgctgcaaagcgaccgtcaacctgatc
ccgggcgacgagatcgccgcggacgacgagggcgaatccgaatccctgctgctgcgccac
aagcgtcgctgcccgaagtgcggcacggcgatggacgcctatctgctcgacgagcggcac
aagctgcacatctgcggcaacaatccggactgccccggctacgagatcgaggagggccag
taccgcatcaagggctacgaggggccgaccctggagtgcgacaagtgcggtagcgagatg
cagctcaagaccggccgcttcggcaagttcttcggctgtaccaacgccgcctgcaagaac
acccgcaagctgctgaagaacggcgagccggcgccgccgaagatggatgcggtgaaaatg
ccggagctgcgctgcgagaaggtcgacgatgtctacgtgctgcgcgacggcgcttccggc
ctgttcctcgccgccagccagttcccgaagaaccgcgagacccgtgcgccgctggtcctg
gaactgttgccgcatcgggacgaaatcgacccgaagtaccacttcctgctggaagcccct
agccacgacccggaagggcgcccagcggtgatccgcttcagccgcaagaccaaggagcaa
tacgtgcagagcgaggtcgagggcaagcccagcggctggcgcgccttccatcgggacggc
cgctgggtggtcgaggacaagcactga
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