Azotobacter vinelandii CA: AvCA_15920
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Entry
AvCA_15920 CDS
T02633
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
avl
Azotobacter vinelandii CA
Pathway
avl00521
Streptomycin biosynthesis
avl00523
Polyketide sugar unit biosynthesis
avl00525
Acarbose and validamycin biosynthesis
avl00541
Biosynthesis of various nucleotide sugars
avl01055
Biosynthesis of vancomycin group antibiotics
avl01100
Metabolic pathways
avl01110
Biosynthesis of secondary metabolites
avl01250
Biosynthesis of nucleotide sugars
Module
avl_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
avl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
AvCA_15920 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
AvCA_15920 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
AvCA_15920 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
AvCA_15920 (rfbB)
00525 Acarbose and validamycin biosynthesis
AvCA_15920 (rfbB)
Enzymes [BR:
avl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
AvCA_15920 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
Motif
Other DBs
NCBI-ProteinID:
AGK13930
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Position
1567776..1568831
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AA seq
351 aa
AA seq
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MTILVTGSAGFIGANFVLDWLHQHDEAVVSLDKLTYAGNLANLKSLEGDDRHVFVKGDIG
DSKLVAGLLAEYQPRAVVNFAAESHVDRSIHGPEDFIQTNIVGTFRLLEAVRVYHAQLHD
GAAAFRFLHVSTDEVYGSLEPTDPAFTERNRYEPNSPYSASKAASDHLVRAYHHTYKLPV
LTTNCSNNYGPYHFPEKLIPLIIHNALSGKPLPIYGDGQQVRDWLYVKDHCSAVRRVLEA
GKLGETYNVGGWNEKTNLDVVHTLCDILDQERPRGDGRSYREQITFVKDRPGHDRRYAID
ATKLERDLGWKPAETFESGIRKTVRWYLDNQGWVENITSGAYRDWVSKHYQ
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgactattctggtaacaggcagcgcaggcttcatcggggcgaactttgtcctggactgg
ctgcaccagcatgacgaggcggttgtcagcctggataagctgacttatgccggtaatctg
gccaatctgaaaagcctggaaggcgatgaccgacatgtcttcgtcaagggcgatataggc
gattcgaagctggtcgccgggcttctggcggaataccagccgcgggccgtcgtcaatttt
gcggcggagtcccatgtggatcgctcgattcacggtccggaagactttatccagaccaac
atcgtgggaaccttccggctactcgaagccgtacgtgtctatcatgctcaactgcatgat
ggtgccgctgctttccgtttcctgcatgtctcgacggacgaagtatacggctcgctggag
cccaccgacccggcgttcaccgagcggaaccgctacgaaccgaacagtccctactcggcc
tccaaggccgcttctgaccatctggttcgagcctatcaccatacttataagctgccggtg
ttgaccaccaactgctcgaataattatggaccgtatcatttcccggaaaagctcatcccg
ctgatcattcacaacgcattgtcaggcaagcccctgcccatttacggcgatggccagcaa
gtccgtgactggctgtacgtgaaagaccattgcagcgcggttcgccgggtgctggaagcg
gggaaactgggtgaaacctataacgtcggaggatggaacgaaaagaccaacctcgatgtg
gtgcataccctttgcgatatcctcgaccaggagcggccgcgtggcgacggccggagctat
cgcgagcaaatcaccttcgtcaaggatcgtcccggacacgatcgtcgctatgccatcgac
gcgaccaagctcgagcgcgatctgggctggaaaccggcggaaactttcgaaagcggcatt
cgcaagaccgttcgctggtatctggacaaccagggctgggtcgaaaatatcaccagcggt
gcttaccgcgactgggtgagcaaacactaccaatga
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