Azotobacter vinelandii CA: AvCA_18940
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Entry
AvCA_18940 CDS
T02633
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
avl
Azotobacter vinelandii CA
Pathway
avl00550
Peptidoglycan biosynthesis
avl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
avl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AvCA_18940 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
avl01002
]
AvCA_18940 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
avl01011
]
AvCA_18940 (dacB)
Enzymes [BR:
avl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
AvCA_18940 (dacB)
Peptidases and inhibitors [BR:
avl01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
AvCA_18940 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
avl01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
AvCA_18940 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
DUF1799
Motif
Other DBs
NCBI-ProteinID:
AGK13379
LinkDB
All DBs
Position
complement(1883686..1885146)
Genome browser
AA seq
486 aa
AA seq
DB search
MIATLRRLAIASLLLPLALSASAAQINTTLPKNVQQALSAHKLPGDALSLVVLPLTGPGV
PTYFNADVPLNPASTMKLVTTYAALELLGPTHKWHTEFYADGPLQGGVLNGNLYLKGGGD
PKLNMERLWLLMRDLRANGVREVRGDLVLDRSHFVQPHLPSFNDDGGDSNKPFLVEPDSL
LINLKALRFIARAEPGKVQISVEPPIAGMSIDNQVQALPAGACPDWPDVRYNLIPQQSGY
SMVVTGKLPAGCSAQSYIAPLDHQTYAAGAVRAIWQELGGSIRGQDRVGNVPRQAQLLVR
ASSPDMVEIIRDINKFSNNTMARQLFLSIGRQYRNGADADDAQAAYRAVRQWMTRKGIDP
RHLVMENGSGLSRTERISAREMAEMLKAAWHSPYAAEFIASMPLVAMDGTMRKRLRRTPL
VGEAHIKTGTLNTVRAISGFSRDQNGNTWAVVAILNHARPWGASSILDQVLVDLYRQPKS
STTAQR
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgattgcaaccttacgccggctggctatcgccagcctgctgctaccgctcgcactgtcg
gcgagcgcggcccagatcaacaccacgctgccgaagaatgtccagcaggcgctgagcgcc
cacaaactcccgggcgacgccctgtccctggtggtactgccactcaccggacccggcgtc
ccgacctacttcaatgccgacgtgccactgaatccggcctcgaccatgaagctggtgacc
acctacgccgccctcgaactgctcggcccgacccacaagtggcataccgagttctacgcc
gacggcccgctgcagggcggcgtgctgaatggcaacctgtacctgaagggcggtggcgac
cccaagctgaacatggaaaggctgtggctgctgatgcgcgacctgcgcgccaatggcgtg
cgcgaagtgcgcggcgacctggtgctcgaccgcagccacttcgtgcagccgcatctgccc
tccttcaacgacgacggcggcgacagcaacaagcccttcctggtcgagcccgactccctg
ctgatcaacctcaaggccctgcgcttcatcgcccgcgccgagcccggcaaggtacagatc
agcgtcgagccgccgatcgccggcatgagcatcgacaatcaggtgcaggcgctgccggcc
ggtgcctgtccggactggccggacgtgcgctacaacctgatcccgcagcagagcggctac
agcatggtggtcaccggcaagctgccggccggctgcagcgcgcagagctacatcgccccg
ctcgaccatcagacctatgccgccggcgccgtgcgcgccatctggcaggagctgggcggc
agcatccgcggacaggaccgcgtcggcaacgtgccccggcaggcgcaattgctggttcgc
gcctcctcgccggacatggtcgagatcattcgcgacatcaacaagttcagcaacaacacc
atggcccggcagttgttcctcagcatcggccggcagtaccgcaacggcgccgatgccgac
gacgcccaggcggcctaccgcgcggtgcgccagtggatgacgcgcaagggcatcgacccg
cggcatctggtgatggagaacggttccggcctgtcgcggaccgaacggatcagcgcccgg
gaaatggccgaaatgctcaaggccgcctggcacagcccctacgccgccgagttcatcgcc
tccatgccgctggtggcgatggacggcaccatgcgcaagcgcctgcgccgcacgcccctg
gtcggcgaggcgcacatcaagaccggcaccttgaacaccgtgcgcgccatctccggcttc
agccgcgaccagaacggcaacacctgggcggtggtcgccatcctcaaccacgcacgtccc
tggggcgcctcgtcgattctcgaccaggtgctggtcgacctgtaccgccagccgaagtcg
tccaccacggcccagcgctga
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