Azotobacter vinelandii CA: AvCA_19120
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Entry
AvCA_19120 CDS
T02633
Name
(GenBank) ATP-dependent DEAD/DEAH box helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
avl
Azotobacter vinelandii CA
Brite
KEGG Orthology (KO) [BR:
avl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
avl03009
]
AvCA_19120
Enzymes [BR:
avl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AvCA_19120
Ribosome biogenesis [BR:
avl03009
]
Prokaryotic type
rRNA helicases
AvCA_19120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
Abhydrolase_1
Motif
Other DBs
NCBI-ProteinID:
AGK15119
LinkDB
All DBs
Position
1898062..1899381
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AA seq
439 aa
AA seq
DB search
MFSQFALHERLLKALAELNFVEPTPVQAAAIPPALEGHDLRVIARTGSGKTAAFVLPLLN
GLIGDARPRVSIRALILLPTRELAQQTLKEVERFSQFTFIKSGLVTGGENFKVQAALLRK
VPDILIGTPGRLLEHLNAGHLDLRDVEVLVLDEADRMLDMGFAEDVQRLVESCANRRQTL
LFSATTGGSGLREMVAKVLREPRHLMLNAVGELSETTRQQIVTADDPAHKERLVHWLLEN
ETYRKAIVFTNTRAQADRLYGHLVAAGHKAFVLHGEKDQKDRKLAIERLRQGGARVLVAT
DVAARGLDVDGLDLVINFDMPRSGDEYVHRVGRTGRAGAEGLAVSLICHNDWNLMSSVER
YLKQRFERRVIKGLKGSYQGPKSLKASGKAAGTKKKKTDDRKGGKKPAAKAAPRRKPAGP
ALVSQDGLAPLKRRTPAPE
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
gtgttttcccaattcgccctgcacgaacgcctgctcaaggcgctggccgaactgaatttc
gtcgagcccacgccggtgcaggcggcagcgattccgccggctctggaggggcacgacctg
cgggtgatcgcccggaccggcagcggcaagaccgcggccttcgtgttgccgctgctcaac
ggcctgatcggcgatgcccgaccgcgggtgagcatccgcgcgctgatcctgctgccgacc
cgcgagctggcgcagcagaccctcaaggaggtcgagcgcttctcgcagttcaccttcatc
aagtccggactggtgaccggcggcgagaacttcaaggtgcaggcggcgctcctgcgcaag
gtgccggacatcctgatcggtacgccgggccgcctgctcgaacacctgaacgccggccat
cttgatctgcgggacgtggaggtgctggtgctcgacgaggccgaccgcatgctcgacatg
ggcttcgccgaagatgtgcagcgcttggtcgagtcttgtgccaaccgtcggcagaccctg
ctgttttccgccaccaccggcggttccgggctgcgcgagatggtcgccaaggtgctgcgc
gagccgcggcacctgatgctcaacgcggtcggcgaactctccgagaccactcgccagcag
atcgtcacggcggacgatccggcccacaaggagcgcctggtgcattggctgctggagaac
gaaacctaccgcaaggcgatcgtcttcaccaacacccgcgcccaggcggaccggctctac
gggcatctggtcgccgccggccacaaggccttcgtcctgcacggcgagaaggaccagaaa
gaccgcaaattggccatcgaacggctcaggcagggcggcgccagggtgctggtggccacc
gatgtggcggcacgcgggttggacgtggacggcctggatctggtgatcaacttcgacatg
ccgcgctcgggcgacgagtacgtgcatcgcgtcggccgcaccggccgggccggcgccgag
ggactggcggtctcgctgatctgccacaacgactggaacctgatgtcgagcgtcgagcgt
tacctcaagcaacgcttcgagcggcgcgtcatcaaggggctcaagggcagctatcagggt
ccgaagagcctcaaggcttccggcaaggccgccggcaccaagaagaaaaagaccgacgac
aggaaaggtggcaaaaagccggccgccaaggccgccccccggcgcaagccggcaggaccg
gcgctggtcagccaggatggcctggccccgctcaagcgtcgcacgccggcgccggaatga
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