Azotobacter vinelandii CA: AvCA_20100
Help
Entry
AvCA_20100 CDS
T02633
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
avl
Azotobacter vinelandii CA
Pathway
avl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
avl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AvCA_20100 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avl03400
]
AvCA_20100 (uvrB)
DNA repair and recombination proteins [BR:
avl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AvCA_20100 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AvCA_20100 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
MIase
Motif
Other DBs
NCBI-ProteinID:
AGK13137
LinkDB
All DBs
Position
1997671..1999680
Genome browser
AA seq
669 aa
AA seq
DB search
MSEFQLVTRFQPAGDQPDAIRQMVEGLEAGLSHQTLLGVTGSGKTFSIANVIARVQRPTL
VLAPNKTLAAQLYGEFKSFFPHNAVEYFVSYYDYYQPEAYVPSSDTYIEKDASINDHIEQ
MRLSATKALMERPDAIIVATVSSIYGLGDPASYLKMVLHIDRGDRLDQRALLRRLADLQY
TRNDLDFARATFRVRGDVIDVFPAESELEAIRIELFDDEVESLAAFDPLTGEVIRKLPRF
TFYPKSHYVTPRETLLEAVEQIKAELKERLEHLRERGKLVEAQRLEQRTRFDLEMILELG
YCNGIENYSRYLSGRAPGLPPPTLYDYLPDNALMVIDESHVTVPQVGAMYKGDRSRKETL
VEYGFRLPSALDNRPMRFDEWERIAPQTIFVSATPGPYEAEHAGRVIEQVVRPTGLVDPE
LEVRPALTQVDDLLSEIRKRVAVEERVLVTTLTKRMAEDLTDYLGDHDVRVRYLHSDIDT
VERVEIIRDLRSGAFDVLVGINLLREGLDMPEVSLVTILDADKEGFLRSERSLIQTIGRA
ARNLNGKAILYADSITGSMRRAIDETERRRAKQIAFNETHGIVPRGVKKDIQDILEGAVV
PGARGRKRVARAAEESGQYAAELRSPSEIDKRIRQLEEKMYALARDLEFEAAARLRDEIQ
ALRERRLQV
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaatttcagctggtgacccgtttccagcccgccggcgaccagcccgatgccatc
cgccagatggtcgaggggctggaggccggcctgtcgcaccagaccctgctcggggtgacc
ggctccggcaagaccttcagcatcgccaacgtgatcgccagggtacagcgtccgaccctg
gtgctggcgcccaacaagaccctggcggcgcagctctacggcgagttcaagagcttcttt
ccgcacaacgcggtggagtacttcgtttcctactacgactactaccagccggaagcctat
gtgccgtcctccgacacctacatcgagaaggacgcctcgatcaacgaccacatcgagcag
atgcgcctgtcggcgaccaaggcgctgatggagcggccggacgcgatcatcgtcgccacc
gtctcgtcgatctacggcctgggcgatccggccagctacctgaagatggtgctgcacatc
gaccgcggcgaccgactcgaccagcgcgccctgctgcgccgcctggccgacctgcagtac
acccgcaacgacctggacttcgcccgcgccaccttccgcgtgcgtggcgacgtgatcgac
gtcttccccgccgaatccgagctggaggcgatccgcatcgagctgttcgacgacgaggtg
gagagtctggccgccttcgatcccttgaccggcgaggtgatccgcaagctgccgcgcttc
accttctaccccaagagccactacgtcaccccgcgcgagacgctgctggaagcggtggag
cagatcaaggccgaactcaaggagcgcctggagcacctgcgcgagcgcggcaagctggtg
gaggcgcagcgcctggaacagcgcacccgcttcgacctggagatgatcctcgaactgggc
tactgcaacggcatcgagaactactcccgctacctctccggccgtgcgccggggctgccg
ccgccgaccctctacgactacctgccggacaacgcgctgatggtgatcgacgaatcccac
gtcaccgtcccgcaggtcggcgccatgtacaagggcgaccgttcgcgcaaggagaccctg
gtggaatacggcttccgcctgccgtcggcgctggacaaccggccgatgcgcttcgacgaa
tgggagcgcatcgccccgcagaccatcttcgtctcggcgacccccggcccctacgaagcc
gagcacgccggacgggtgatcgaacaggtggtgcgccccaccgggctggtcgaccccgag
ctggaggtgcgcccggcgctgacccaggtggacgacctgctgtcggagatccgcaagcgc
gtcgccgtcgaggagcgcgtgctggtcaccaccctgaccaagcgcatggccgaggacctc
accgattacctcggcgaccacgacgtgcgggtgcgctacctgcactcggacatcgacacc
gtggagcgcgtggagatcatccgcgacctgcgcagcggcgccttcgacgtgctggtgggc
atcaatctgctgcgcgaggggctggatatgcccgaagtatcgctggtgacgattctcgac
gcggacaaggaaggtttcctgcgcagcgaacgctcgctgatccagaccatcggccgcgcc
gcgcgcaacctcaacggcaaggcgattctctacgccgacagcatcaccggttcgatgcgg
cgcgccatcgacgagaccgagcggcgccgggccaagcagatcgccttcaacgaaacccac
ggcatcgtgcccaggggcgtcaagaaggacatccaggacatcctcgaaggcgccgtggtg
cccggtgcgcgcggtcgcaagcgggtggccagggcggcggaggagagcggccagtacgcc
gccgagctgcgctcgccgagcgagatcgacaagcgcatccgtcagctcgaggagaagatg
tacgccttggcccgcgatctggagttcgaggccgcggcgcggctgcgcgacgagatccag
gcgctgcgcgagcggcggctgcaggtctga
DBGET
integrated database retrieval system
