Azotobacter vinelandii CA: AvCA_29630
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Entry
AvCA_29630 CDS
T02633
Name
(GenBank) Peptidoglycan-binding LysM:SLT:MLTD N domain protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
avl
Azotobacter vinelandii CA
Brite
KEGG Orthology (KO) [BR:
avl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
avl01011
]
AvCA_29630
Enzymes [BR:
avl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
AvCA_29630
Peptidoglycan biosynthesis and degradation proteins [BR:
avl01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
AvCA_29630
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LPAM_MltD
LysM3_LYK4_5
HTH_Tnp_4
HTH_23
SLT_2
LysM_RLK
LPAM_1
DUF6491
Pilus_CpaD
Motif
Other DBs
NCBI-ProteinID:
AGK14100
LinkDB
All DBs
Position
3060295..3061635
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AA seq
446 aa
AA seq
DB search
MSKSLLGGVVPGVLARRSPLLVALLATALAGCQSTNQRPDDEYSRLVAKPKRETLWLEQA
ASAQPQDIWVRMREGFSLQDEIDVNPRIERQRLWFVSNPLHIDKVSERGALYMHYIVERL
EERGMPLELALLPVIESAYNPLAYSRAHAVGLWQFIPSTGRDYNLHQTQWYDGRRDITAS
TQAAIEYLSKLHDMFNGDWLLALASYNAGEGTVSRAIERNRRLGLPTDYWNLPLPKETQD
YVPKLLALSQVIMTPEAYGISLSPIANEPYFDRVEIGGSMELSRLAEMAGIDKGELLRLN
PAYKRGITLDGPQYLLVPTESAERLQLSLGRTPEQLAEWRKQRLAASHGGVRPRRPELHR
TFSLQQATTPPSAARLLALEEERPPRRTSVAGKKRKAVTYYKVRKGDSLHRIAQRFQVDT
KTLQRWNSLSGRTIRPGQTLTLFLAN
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagtcacttttaggaggcgttgtcccaggtgttctggcgaggcgtagcccgctc
ctcgtcgccctcctggccaccgcactggcaggctgccaaagtaccaatcagcgacccgat
gacgaatattcgcgcctggtcgcgaagcccaagcgcgaaacactgtggctggaacaggcc
gccagcgcgcagcctcaggacatctgggtacgcatgcgcgaaggtttctcgctgcaggac
gagatagacgtcaacccgcgcatcgagcgccagcgcctgtggttcgtcagcaacccgttg
cacatcgacaaggtcagcgagcgcggcgccctctacatgcattacatcgtcgagcgcctg
gaagaacgtggcatgccgctggagctggccctgctgccggtcatcgagagcgcctacaac
ccgctcgcctattcccgcgcccatgcggtgggcctctggcagttcattccctccaccggt
cgcgactacaacctgcaccagacccagtggtacgacggccgccgcgacatcaccgcctcc
acccaggcggcgatcgagtacctctccaagcttcacgacatgttcaacggcgactggctg
ctcgccctggcctcctacaacgccggcgagggcacggtcagccgggccatcgagcgcaac
cgccggctcggcctgcccaccgactactggaacctgccgctgcccaaggaaacccaggac
tacgtgcccaagctgctggccctgtcccaggtgatcatgactcccgaagcctatggcatc
agcctgagcccgatcgccaacgagccctatttcgatcgggtggagatcggcggcagcatg
gagctgtcgcgcctcgccgagatggccggcatagacaagggcgaactgttgcggctgaac
ccggcctacaagcgcggcatcaccctggacgggccccagtacctgctggtgccgaccgaa
agcgccgaacggctgcagctcagcctgggacgcacgcccgagcaactggccgaatggcgg
aaacagcgcctggccgccagccacggcggcgtccgcccgagaaggccggaactgcatcgg
accttcagcctgcagcaggccaccacgccgcccagcgccgcacggctgctggccctggag
gaagagcggccgccgcggcggacgtccgtcgccggcaagaagcgcaaggcggtgacctac
tacaaggtgcgcaagggggattcgctccaccgcatcgcccagcgcttccaggtggacacc
aagacattgcagcgctggaattccctgagcggccggaccatccgcccggggcagaccctg
accctcttcctggcgaactga
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