Azotobacter vinelandii CA: AvCA_37070
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Entry
AvCA_37070 CDS
T02633
Symbol
rumA
Name
(GenBank) 23S rRNA 5-methyluridine methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
avl
Azotobacter vinelandii CA
Brite
KEGG Orthology (KO) [BR:
avl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
avl03009
]
AvCA_37070 (rumA)
Enzymes [BR:
avl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
AvCA_37070 (rumA)
Ribosome biogenesis [BR:
avl03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AvCA_37070 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
MTS
RrnaAD
TRM5-TYW2_MTfase
PCMT
Methyltransf_11
Methyltr_RsmB-F
Cons_hypoth95
Methyltransf_15
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
AGK12929
LinkDB
All DBs
Position
complement(3764471..3765835)
Genome browser
AA seq
454 aa
AA seq
DB search
MTRRTGGLRFQPSGGARSAPLQVGRKQVLSIERLAHDGRGIAFVDGRTWFVSGALAGERV
EARVLGARNRIVDAHAERILAAGPLRRAAPCAHAGRCGGCTLQALPHAEQLALKQRTLAE
QLARFAGLAPEEWAPPLVGPEFGYRRRARIAVRWDATSGRLEVGFRAAASQAIVAIDDCP
VLVRPLQPILRALPALLHGLARPRALGHVELFHGNTSAILVRHTAPLADADLQRLRVFCR
EHAAQLWLQGRDEPRADAPEAPLGYRLEPWGLELHYRPGDFVQVNAVVNEAMVVQALEWL
APRPEERVLDLFSGLGNFALPLAQRSREVVAVEGVAPMVERGRENATRNGLNNLHFWQAD
LSKPLAGASWAAAGFAAVLCDPPRDGALEAVRQVGSLGAGRVLYVSCNPATLARDATELA
GQGYRLRRAGILDMFPQTAHVEAMALFEREPAAG
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
gtgactagacgtaccggcggcctgcgcttccagcccagcggcggtgcccgctcggcgccc
ctgcaggtgggcaggaagcaggtcctgagcatcgagcgcctggcccacgacggccgtggc
atcgccttcgtcgacggccgtacctggttcgtctccggcgccctggccggcgagcgggtc
gaggcccgtgtgctcggcgcgcgcaaccgtatcgtcgatgcccacgccgagcgcatcctg
gccgccggcccgttgcgccgcgccgcgccctgcgcgcatgccggccgttgcggcggctgc
accctgcaggcattgccccatgccgagcaactggccctgaagcagcgcaccctcgccgag
caactggcgcgcttcgccggcctcgcacccgaggagtgggcgccgcccctggtcggtccg
gaattcggctaccgccgccgggcgcgcatcgcggtgcgctgggatgccacctccgggcgg
ctggaggtgggctttcgcgccgcggccagccaggcgatcgtcgccatcgacgattgcccg
gtgctggtgcggccgctgcagcccatcctgcgcgccttgcccgcgcttctccacggtctg
gcgaggccccgggcgctgggccatgtcgagttgttccacggcaatacaagcgccattctg
gtgcgccatactgcgccccttgcggacgctgacctgcagcgcctgcgcgtcttctgtcgc
gaacacgccgcccagctctggctgcagggcagggacgagccgcgggcggacgcaccggag
gccccgctgggctaccgcctggagccctggggactggagctgcactaccgtcccggcgac
ttcgtgcaggtcaacgccgtggtgaacgaggcgatggtcgtccaggccctggagtggctg
gcgcctcggccggaggaacgggtgctcgatctgttcagcggtctgggcaacttcgccctg
ccgctggcgcagcgctcgcgcgaggtggtggcggtggagggcgtggcgccgatggtcgag
cgcggcagggaaaatgcgacccgtaatggactgaacaacctgcacttctggcaagcggac
ctgtcgaagccgctggcaggggcgtcctgggctgccgccggcttcgccgcagtgctgtgc
gatccgccccgtgacggcgcgctggaggccgtgcggcaggtgggcagcctgggagccggg
cgggtgctatatgtttcctgcaatccggcgaccctggcacgggatgccacggaactggcc
ggacagggctatcggctgcggcgtgccggcattctcgatatgttcccgcagaccgcccat
gtcgaggccatggcgttgttcgagagagagcccgcggcgggctga
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