Azotobacter vinelandii CA: AvCA_38720
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Entry
AvCA_38720 CDS
T02633
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
avl
Azotobacter vinelandii CA
Brite
KEGG Orthology (KO) [BR:
avl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
avl03016
]
AvCA_38720 (truD)
Enzymes [BR:
avl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
AvCA_38720 (truD)
Transfer RNA biogenesis [BR:
avl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AvCA_38720 (truD)
Prokaryotic type
AvCA_38720 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AGK12724
LinkDB
All DBs
Position
complement(3916505..3917563)
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AA seq
352 aa
AA seq
DB search
MSESELLGPRAYGEACGQALLKACAEDFQVDEVLDIPLSGQGEHLWLWVEKRGLNTEEAA
RRLARAAGMPLKAISYAGLKDRQALTRQWFSLHLPGKADPDLVAAEDDSLRILERVRHSR
KLQRGAHAANGFKLRLTRLAADRPALDARLEQLRRQGVPNYFGLQRFGHDGGNLAEARAF
AVRRELPAQRNLRSRLLSAARSYLFNRVLAERVAVGDWNRAQPGDLLAFTDSRSFFPAGV
EECADPRLALLDLHPTGPLWGAGGSPAGAATKVLEDAVGRCEAPLGDWLGEAGMLHERRI
LRLPIDRLAWHYPAIDILQLEFVLPAGCFATVVVRELVDLWPAGLMDTSCVF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagtccgaactgctcggtcccagggcatatggcgaagcctgcggccaggcactg
ctcaaggcctgcgccgaggacttccaggtcgacgaggtgctggacattcccctgagtggg
cagggcgagcatctctggttgtgggtggaaaagcgcgggctgaataccgaggaggcggct
cggcgcctggcccgtgccgccgggatgccgctgaaggcgatcagctatgccggtctgaag
gatcgccaggcgctgacccgccagtggttcagcctgcacctgccgggcaaggccgatccc
gacctcgtggccgcggaggacgacagcctgcgtatcctcgagcgtgtccgccactcgcgg
aaactgcaacgtggtgcccacgcggccaacggtttcaagctgcggctgactcgcctcgcc
gccgatcgtccggcgctggatgcgcgtctggagcagctccgccgccaaggagtgcccaac
tacttcggcctgcagcgtttcggccacgacggcggcaatctcgccgaggccagggccttc
gccgtgcggcgggaactgcctgcgcaacgcaacctgcgctcgcgtctgctctcggcagcg
cgcagctatctgttcaaccgggtgctggccgagcgggtcgcggtaggcgactggaatcgg
gcgcagccgggagacctgctggctttcaccgacagccgcagtttcttcccggcgggcgtg
gaggagtgcgccgacccgcgcctggcactgctcgacctgcatcccaccggcccgctctgg
ggcgcgggcggctccccggccggcgcggcgaccaaggtgctggaggatgccgtcggccgg
tgcgaggcgccactcggcgactggctgggggaagcgggcatgctgcacgaacggcgcatc
ctgcgcctccccatcgaccggctggcgtggcattatcccgccatcgacatcttgcaactg
gaattcgtcctgccggccggctgcttcgccactgtcgtggtccgcgagctcgtcgatctg
tggccggcaggcttaatggacacttcatgcgtattctga
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