Azotobacter vinelandii CA: AvCA_39770
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Entry
AvCA_39770 CDS
T02633
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
avl
Azotobacter vinelandii CA
Pathway
avl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
avl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
AvCA_39770 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avl03400
]
AvCA_39770 (xseA)
Enzymes [BR:
avl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
AvCA_39770 (xseA)
DNA repair and recombination proteins [BR:
avl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
AvCA_39770 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AGK12477
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All DBs
Position
4028045..4029415
Genome browser
AA seq
456 aa
AA seq
DB search
MLNDPFQRLGLDREILTVSQLNGRARALLEDVFAQVWVEGEISNLARPASGHLYFTLKDR
QAQVRCALFRQNALRVREILRDGLAVRVRGRVSLYEGRGDFQLILDLLEPAGDGALRLAF
EALKEKLAAEGLFAAERKRPLPAHPRSIGIVSSPTGAVIRDIVSVFRRRAPQVELTLVPT
AVQGREAVAQIVHALELADRQGFDALILARGGGSLEDLWCFNEEVVARAVAACATPVVSA
VGHETDVTIADFVADLRAPTPSAAAELLAPDSSDLQRRLDGLQRRLQLRMRHLLAARRLQ
LDGLSRRLRHPGERLQQQAQRLDDLELRLRRAMQRRLQGDAERLARLDTRLAAQHPERLL
GLLRQRLEHLAERLPRAMRSTLRERRQRLEATAQTLQAVSPLATLGRGYAILLDERGRAI
RAAVQAHPGQRLHARLAEGALELRVEAAFPSPPQPD
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgctcaacgatcccttccaacgcctcggcctcgaccgggaaatcctcaccgtcagccag
ctcaacggccgcgcccgcgcgctgctggaggacgtgttcgcccaggtctgggtcgagggc
gagatttccaacctcgcccgcccggcctccggccacctctatttcaccctcaaggaccgc
caggcccaggtgcgctgcgcgctgttccggcagaacgccctgcgcgtgcgcgagatcctg
cgcgacggactggcggtgcgggtgcgcggcagggtctcgctgtacgaggggcgcggcgac
ttccagttgatcctcgatctgctcgaaccggccggcgacggcgccctgcgcctggccttc
gaggcgctcaaggaaaaactcgccgccgaaggcctgttcgccgccgagcgcaagcgcccg
ctgccggcccatccgcggagcatcggcatcgtcagctcgccgaccggcgcggtgatccgc
gacatcgtctcggtgttccgccgccgcgcgccgcaggtcgaactgaccctggtgcccacc
gcggtgcagggccgcgaggcggtcgcacagatcgtccatgccctcgaactggccgatcgc
cagggcttcgacgcgctgatcctggctcgcggcggcggctctctggaggatctctggtgc
ttcaacgaagaagtcgtggcgcgcgccgtcgccgcctgcgcgacgcccgtggtcagcgcc
gtcggccacgagaccgacgtgaccatcgccgatttcgtcgccgacctgcgcgccccgacc
ccctcggccgccgccgaactgctggcccccgacagcagcgacctgcagcgccgcctcgac
ggtctgcagcgccgcctgcaactgcgcatgcggcacctgctcgccgcccgccgcctgcag
ctcgacggcctgagccggcgcctgcgacatcccggcgagcgcctgcagcagcaggcccag
cgcctcgacgacctggagctgcgcctcaggcgcgccatgcagcgccgtctgcagggcgac
gccgagcgcctggcgcgcctcgacacccgcctcgccgcccagcatcccgaacgcctgctc
ggccttttgcgccagcgcctggagcatctcgccgagcgcctgccgcgcgccatgcgcagc
accctgcgcgagcggcgccagcgtctcgaagccaccgcgcagaccctgcaggcggtcagc
ccgctggcgaccctcggccgcggctacgcgattctcctcgacgagcggggccgggcgatc
cgcgccgccgtccaggcccatcccggccagcgcctgcacgcgcgtctcgccgaaggcgca
ctggagttgcgggtcgaagccgccttcccttccccgccacagccggactga
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