Azotobacter vinelandii CA: AvCA_40940
Help
Entry
AvCA_40940 CDS
T02633
Name
(GenBank) RNA polymerase sigma factor, FecI family
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
avl
Azotobacter vinelandii CA
Pathway
avl02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
avl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AvCA_40940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
avl03021
]
AvCA_40940
Transcription machinery [BR:
avl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AvCA_40940
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_38
RESC8
KORA
HTH_20
HTH_10
GerE
Motif
Other DBs
NCBI-ProteinID:
AGK16065
LinkDB
All DBs
Position
complement(4130240..4130740)
Genome browser
AA seq
166 aa
AA seq
DB search
MPVQPPGPFHTLYSQHHDWLKGWLRSRIGNTSDAADLAQDTFMRVLANRNADGIREPRTY
LSTIARALLIDHFRRQSIERAYLEALAARPEPLAISPETRLAILETLTAIDAMLDGLGER
TRAIFLAVQLEGLGYAAVGERLGVSVTTVKKHLIRAMTHCLLLMDD
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
atgcccgttcagcctcccggccccttccacaccctctacagccagcatcacgactggctg
aaaggctggctgcgcagccgcatcggcaacaccagcgacgccgccgacctggcccaggac
accttcatgcgcgtgctggcgaaccgtaacgccgacggcatccgcgagccgcgcacctac
ctgagcaccatcgcccgcgccctgctgatcgaccacttccgccgccagagcatcgagcgc
gcctacctggaagcactggccgcgcgccccgagccgctggccatctcccccgagacgcgg
ctggccatcctggaaaccctcaccgccatcgacgccatgctcgatggactgggcgaacgc
acccgcgcgatctttctcgccgtccagctcgaagggctcggctacgcagccgtgggcgaa
cgcctcggcgtctcggtcaccaccgtgaaaaaacacctgatccgcgccatgacccactgt
ctgctgctgatggacgactga
DBGET
integrated database retrieval system
