Azotobacter vinelandii CA: AvCA_43920
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Entry
AvCA_43920 CDS
T02633
Name
(GenBank) histone-like DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
avl
Azotobacter vinelandii CA
Brite
KEGG Orthology (KO) [BR:
avl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
avl03032
]
AvCA_43920
03036 Chromosome and associated proteins [BR:
avl03036
]
AvCA_43920
03400 DNA repair and recombination proteins [BR:
avl03400
]
AvCA_43920
DNA replication proteins [BR:
avl03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AvCA_43920
Chromosome and associated proteins [BR:
avl03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
AvCA_43920
DNA repair and recombination proteins [BR:
avl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
AvCA_43920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
DUF2530
HU-CCDC81_euk_1
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
AGK15967
LinkDB
All DBs
Position
complement(4439983..4440255)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSELIASVSTHADLDKNTATKVVNALLETITAELKAGHEVGLIGFGTFSVKERAARTG
RNPQTGKEIEIAAAKTPGFKAGKGLKEAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatccgaactgatcgccagcgtatccacccacgccgatctcgataagaacact
gccaccaaggttgtcaatgcgctgctggaaacgatcacggcggagctgaaagccggtcat
gaagtggggctgatcgggttcgggaccttcagcgtcaaggagcgggcggcgcgtaccggg
cgcaatccccagacaggcaaggagatcgagatcgctgcggcgaaaacgcccggtttcaag
gcgggcaagggcctgaaagaggccgtgaactaa
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