Azotobacter vinelandii CA: AvCA_47100
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Entry
AvCA_47100 CDS
T02633
Symbol
vnfA3
Name
(GenBank) sigma54-dependent activator protein
KO
K02584
Nif-specific regulatory protein
Organism
avl
Azotobacter vinelandii CA
Pathway
avl02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
avl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AvCA_47100 (vnfA3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
avl03000
]
AvCA_47100 (vnfA3)
Transcription factors [BR:
avl03000
]
Prokaryotic type
Helix-turn-helix
Other families
AvCA_47100 (vnfA3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
GAF
GAF_2
GAF_3
AAA_5
AAA
Mg_chelatase
bpMoxR
AAA_2
AAA_16
Parvo_NS1
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AGK14065
LinkDB
All DBs
Position
complement(4780763..4782316)
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AA seq
517 aa
AA seq
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MKPHSANARPGRELPVQDKPCEWDMGECRTDLLPLLGELGRISSEGSDLAGILRVLLELM
QRHLKVARGMVTLRDPESGRIFVQQGCGLSEEEEASGSLAHGEDIVAQVVDSGRTVLLPG
EAGSQSFLCVPIRRDRKVLGAIVAERHYANRQMLELDAEILAILAATTAQAVELHLQEHV
RKVALEDENRRLRSALQSRFKPSNIIGNSRPLQEVYGLIEKVTRSRTTVLILGENGVGKE
LVASAIHYNSSSAEGPFVKFNCAALPESVIESELFGHERGAFTGAATQRRGRFEAADGGT
IFLDEVGELSLAMQAKLLRVLQEKSFERVGGNVTHQVDLRILAATNRDLRAMVEQGRFRE
DLYYRLNVFPITVPPLRERGSDVATLAEHFVARFSGEMGVTVERISAPAMSMLMCYHWPG
NVRELENVIERAVILCEDAVIEPHHLPPSLQTPAVSESPSAGGILDVRLRQAEHEMIVEA
LKRHKGNMTEAATHLGLTRRILGLRMARHNLNYKDFR
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgcattcggcgaacgcgcgtcccggtcgggaactgccggtccaggacaagccc
tgcgaatgggacatgggtgaatgccgcaccgatctgttgccgctgctcggcgaactgggg
cgcatctccagcgagggcagcgacctggccggcatcctgcgggtgctgctggaactgatg
cagcgccatctgaaggtcgcgcgcggcatggtgaccctgcgcgatccggaatcggggcgg
atcttcgtccagcagggctgcggcctgagcgaggaggaggaggcctcgggcagcctcgcc
cacggcgaggacatcgtcgcccaagtggtggacagcgggcggacggtgctgctgccgggc
gaggcgggcagccagtccttcctctgcgtgccgatccgccgcgaccgcaaggtgctgggc
gccatcgtcgccgagcgccactacgccaaccgccagatgctcgagctggacgcggagatt
ctcgccattctcgccgccaccaccgcccaggcggtggagctgcacctgcaggagcacgtg
cgcaaggtcgccctggaggacgagaaccgccgcctgcgctcggccctgcagagtcgcttc
aagcccagcaacatcatcggcaattcgcggccgctgcaggaggtctacgggttgatcgag
aaggtcacccgctcgcggaccacggtactgatcctcggcgagaacggcgtgggcaaggaa
ctggtggccagcgccatccactacaacagcagcagcgccgagggtcccttcgtcaagttc
aactgcgccgccctgccggagagcgtcatcgagagcgagctgttcggccacgagcgcggc
gccttcaccggggcggcgacccagcggcgcgggcgcttcgaggcggccgacggcgggacc
atcttcctcgacgaggtgggcgagctgtccctggccatgcaggccaagctgctgcgggtg
ctgcaggagaagagcttcgaacgggtcggcggcaacgtcacccaccaggtcgacctgcgc
atcctcgccgccaccaaccgcgacttgcgggcgatggtggagcagggccgcttccgcgag
gatctctactaccggctcaacgtcttccccatcaccgtgccgccgctgcgcgagcgcggc
tccgacgtcgccaccctggcggagcatttcgtcgcgcgcttctccggcgagatgggcgtc
acagtggagcgcatctccgcgccggcgatgagcatgctgatgtgctaccactggccgggc
aacgtgcgcgagctggagaacgtcatcgagcgggcggtcatcctctgcgaggatgcggtc
atcgaaccgcatcacctgccgccttcgctgcagaccccggcggtttccgagagcccgtcc
gccggcggcattctcgatgtccgcctgaggcaggccgagcacgagatgatcgtcgaggcg
ctcaagcggcataagggcaacatgaccgaggccgccacccatctgggtctgacccggcgc
atcctcggcctgcgcatggcccggcacaacctgaactacaaggatttccgctga
DBGET
integrated database retrieval system
