KEGG   Azotobacter vinelandii CA: AvCA_47170
Entry
AvCA_47170        CDS       T02633                                 
Name
(GenBank) RNA polymerase sigma factor, FecI family
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
avl  Azotobacter vinelandii CA
Pathway
avl02020  Two-component system
Brite
KEGG Orthology (KO) [BR:avl00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    AvCA_47170
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:avl03021]
    AvCA_47170
Transcription machinery [BR:avl03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AvCA_47170
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_ECF Sigma70_r4 HTH_23 HTH_24 HTH_28 HTH_11 GerE PhyR_sigma-like HTH_3 HTH_36 HTH_7 HTH_40 HTH_38 DUF1804 HTH_20 HTH_IclR Xre-like-HTH HTH_29 TnsD HTH_26 Terminase_5 HTH_AsnC-type HTH_17 HTH_Tnp_4 HTH_31 HTH_10 MarR_2 HTH_Tnp_ISL3 RICTOR_N DUF8658 wHTH-PRTase_assc
Other DBs
NCBI-ProteinID: AGK14261
LinkDB
Position
4789855..4790337
AA seq 160 aa
MLHSLYLDHRLWLNGWLRRRLSCPHSADDLTQDAFVQVMGSRDLLRLEQPRAFLTTIAKR
LLFNHYRRQDIERAYLEALAALPAAEQPSEEVRAIAMETLLELARLLEDLPLPVRQAFLY
AQLDGLSYAEIAARLGISLATVKRYIAKAAQRCYFAESYE
NT seq 483 nt   +upstreamnt  +downstreamnt
gtgctgcacagcctctacctggaccatcgcctctggctcaacggctggctcaggcgccgc
ctgagctgcccgcacagcgccgacgacctgacccaggacgccttcgtgcaggtcatgggc
tcccgcgatctgctgcgcctcgaacagccgcgggctttcctgaccaccatcgccaagcgg
ctgctgttcaaccactaccgccgccaggatatcgagcgcgcctatctcgaagccctggcc
gcgcttcccgcggcggagcagccgagcgaggaagtccgcgccatcgccatggagaccctg
ttggagctggcgcggctgctcgaggacctgccgctgccggtccgccaggcgttcctctac
gcccagctcgacggcctgtcctatgccgagatcgccgcgcgcctcggcatctccctggcc
acggtcaagcgctacatcgccaaggcggcgcagcgctgctacttcgccgagtcgtacgaa
tga

DBGET integrated database retrieval system