Azotobacter vinelandii CA: AvCA_49020
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Entry
AvCA_49020 CDS
T02633
Symbol
anfA
Name
(GenBank) sigma54-dependent transcriptional activator for the iron only nitrogenase, AnfA
KO
K02584
Nif-specific regulatory protein
Organism
avl
Azotobacter vinelandii CA
Pathway
avl02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
avl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AvCA_49020 (anfA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
avl03000
]
AvCA_49020 (anfA)
Transcription factors [BR:
avl03000
]
Prokaryotic type
Helix-turn-helix
Other families
AvCA_49020 (anfA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
HTH_8
AAA_5
AAA_2
AAA
HTH_50
GAF_3
MCM
Mg_chelatase
nSTAND3
AAA_16
AAA_3
bpMoxR
RsgA_GTPase
AAA_6
Parvo_NS1
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AGK13256
LinkDB
All DBs
Position
complement(4962790..4964403)
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AA seq
537 aa
AA seq
DB search
MSDQATFEFDTDYFVEEFSHCFTGECRVKMLPILYKISQIITGNADLADALSIVLGVMQQ
HLKMQRGIVTLYDMRAETIFIHDSFGLTEEEKKRGIYAVGEGITGKVVETGKAIVARRLQ
EHPDFLGRTRVSRNGKAKAAFFCVPIMRAQKVLGTIAAERVYMNPRLLKQDVELLTMIAT
MIAPLVELYLIENIERVRLENENRRLKHALKERFKPSNIIGNSKPMQEVYELIHKVASTK
ATVLILGESGVGKELVANAIHYNSPNAEAALVTSNCAALPENLAESELFGHEKGSFTGAL
TMHKGCFEQADGGTIFLDEVGELSPTVQAKLLRVLQNRTFERVGGSKPVKVDVRIIAATN
RNLVEMVEQGTFREDLYYRLNVFPITVPPLRERGSDVIALADHFVSAFSRENGKNVKRIS
TPALNMLMSYHWPGNVRELENVMERAVILSDDDVIHSYNLPPSLQTSKESGTAFGLTLEE
KIKAVECEMIVEALKNSSGHIGEAAKELGLTRRMLGVRMERYGISYKSFRGTHDTDE
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatcaggcaaccttcgagttcgacacggattacttcgtcgaggagttcagccac
tgcttcaccggcgagtgccgggtgaagatgctccccatcctgtacaagatcagccagatc
attaccggcaatgccgatctggccgatgccctgtccatcgttctgggcgtcatgcagcag
cacctgaagatgcagcgcggcatcgtcacgctctacgacatgcgtgccgaaaccatcttc
atccacgatagcttcggcttgacggaagaggagaagaaacgcggcatctacgctgtcggc
gagggcatcaccggcaaggtggtggaaacgggcaaggccattgtcgcccggcgtttgcag
gagcatccggactttctggggcgcacccgggtatcccgcaacggcaaggccaaggcagcg
tttttctgtgtgcccatcatgcgtgcccagaaagtgctgggcaccatcgctgcggagcgg
gtttacatgaatccgcgcctgctcaagcaggatgtcgaactgctgaccatgatcgccacc
atgatcgctcccctggtcgagttgtacctgatcgagaacatcgaaagggtgcgtctggaa
aacgaaaaccgtcgcctgaagcatgcgttgaaggagcgtttcaagccttccaacatcatc
ggcaattccaagcccatgcaggaggtgtacgaactgattcacaaggtggcctccaccaag
gccacggtgctgatcctgggggaaagcggagtcggcaaggaactggtggccaacgccatc
cactacaacagccccaatgccgaggctgctctcgtcacctccaactgcgcggcgctgccg
gagaatctggcggaaagcgaactcttcggccatgaaaagggctcctttaccggagccttg
accatgcacaagggctgtttcgagcaggccgatggcggcaccatcttcctggacgaggtc
ggcgaactgagcccgacggtccaggccaagctgctgcgggtgctgcagaaccgtaccttc
gagcgggtagggggcagcaagccggtcaaggtggatgtgcgcatcatcgcggcgaccaac
cgcaacctggtggaaatggtggagcagggcacttttcgtgaagacctgtattaccgcctc
aatgtctttcccattaccgtcccgccgttacgtgagcggggcagcgacgtcatcgccctg
gcagatcactttgtcagcgccttttccagggagaacggcaagaacgtcaagcgcatctcc
acgccggcgctcaacatgttgatgagctatcactggccgggcaatgtccgcgaactggaa
aacgtcatggagcgtgcggtcattctgtccgatgacgatgtgatccatagctacaatctg
cccccctccctgcagacctccaaagagagcggtacggccttcgggctcaccctggaggaa
aagataaaggctgtcgagtgcgagatgattgtggaggccttgaaaaactccagcggtcac
ataggggaggcggccaaggagctgggtttgacgcggcgcatgcttggcgtacggatggag
cgttatggcatcagttataaaagttttcgcggtacgcatgataccgatgagtga
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