Azotobacter vinelandii CA: AvCA_51700
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Entry
AvCA_51700 CDS
T02633
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
avl
Azotobacter vinelandii CA
Pathway
avl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
avl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AvCA_51700 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avl03400
]
AvCA_51700 (recD)
Enzymes [BR:
avl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AvCA_51700 (recD)
DNA repair and recombination proteins [BR:
avl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AvCA_51700 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
UvrD_C_2
AAA_11
SH3_13
NAT10_TcmA_helicase
Viral_helicase1
AAA_22
UvrD-helicase
AAA_16
AAA_17
TraI_hel_assoc_N
PhoH
SLFN-g3_helicase
Mg_chelatase
AAA_25
AAA_28
NTPase_1
nSTAND3
T2SSE
AAA_5
ATPase
Motif
Other DBs
NCBI-ProteinID:
AGK13918
LinkDB
All DBs
Position
complement(5260122..5262233)
Genome browser
AA seq
703 aa
AA seq
DB search
MSEQLPLELESAAPSAALRDAESLLALLDAWVERGWLRALDRALAGFFRELDESCPPLAL
LACALASHQLGHGHVCLDLAATLVSPDFALSLPPEGEDAARASLLPSEILAGVVPSQWRT
ALAASRLVAVDGLGEAAPLVLAGERLYLRRYWSHERAVAAAIGARLRDAPALPADLAVRL
ARLFPEPPVVDGERRTDWQKLACALAARGSFSLITGGPGTGKTTTVVRLLALLQGPALEA
GQALRIRLAAPTGKAAARLTESIGAQVASLAVDDALRKAIPSEVTTLHRLLGSLPDSRHF
RHHAGNLLPLDVLVIDEASMIDLEMMACLLDALPRHARLILLGDKDQLASVEAGALLGDL
CRDAEGGFYGAETRAWLEAVGGEPLADPALREGDGERRPLAQRTVMLRHSRRFGGGSGIG
RLARAVNCRDAAQARSILAESGRDLHVLRLRGEADRAFERLALDGLPARGESRPQGYAHY
LKLLRESRPAADCPPDHEDWKNWAAAVLEAFDEFQLLCAVRKGPWGVEGLNPRIAAALHR
RSLLDGDQGWYEGRPVLMTRNDYSLGLMNGDIGIALRLPEPPEQPGAKPQTVLRVVFPRN
DGSGGLRWVLPSRLSAVETVFAMTVHKSQGSEFAHTALILPDTLNPVLTKELIYTGITRA
RHWFSLVESRPGVFDEAVRRQVERRSGLVEALEGRPSPPAPLP
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacaactgcccctggaattggaaagcgcggcgccgtcggccgccctgcgcgat
gccgagagcctgctggcgctgctcgacgcctgggtcgagcgcggctggctgcgcgccctg
gaccgcgccctggccggcttcttccgcgagctggacgagtcctgcccgccgctggcgctg
ctcgcttgcgccctggccagccaccagctcggccatggccacgtctgcctggacctggcg
gcgaccctggtcagcccggacttcgccctgtcgctgccgccggaaggcgaggatgccgcg
cgcgccagcctcttgccctcggagattctcgccggcgtcgtgccgagccagtggcgaacg
gcgctggccgccagccgcctggtggccgtcgacggacttggcgaggcagcgcccctggtg
ctcgccggcgaacgcctctacctgcgccgctactggagccacgagcgcgcggtggcggcg
gcgatcggcgcgcgcctgcgggatgcgccggccttgccggccgatctcgccgtccgcctg
gcccggctctttcccgagccgccggtggtcgatggcgagcgccggaccgactggcagaaa
ctcgcctgcgccctggccgcgcgcggcagcttcagcctgatcaccggcggtcccggcacc
ggcaagaccaccaccgtggtacgcctgctggcgctgttgcaggggccggcgctggaggcc
ggccaggcgctgcgcatccgcctcgccgcgccgaccggcaaggccgccgcgcggttgacc
gagtccatcggcgcccaggtcgcctcgctggcggtggacgacgcgctgcgaaaggccatc
cccagcgaggtcaccaccctgcaccggctgctcggcagcctgccggacagccgccacttc
cgccaccacgccggcaaccttctgccgctggacgtgctggtgatcgacgaagcctcgatg
atcgatctggagatgatggcctgcctgctcgacgccctgccgcgccacgcccggctgatc
ctgctcggcgacaaggaccaactcgcctcggtggaggccggcgccctgctcggcgatctg
tgccgcgacgccgaaggcggtttctacggcgccgagacccgtgcctggctggaggcggtc
ggcggcgaaccgctcgccgatcccgccttgcgcgaaggcgacggcgaacgccggccactg
gcccagcgcacggtgatgctgcgccactcgcggcgcttcggcggcggctcgggcatcggc
cgcctggcccgcgcggtcaactgccgcgatgcggcgcaggcgcgctccatcctcgccgag
agcggccgcgatctgcatgtgctgcgcctgcgcggcgaagcggaccgggcgttcgagcgc
ctggcactcgacggcctgccggcgcggggcgagtccaggccgcagggttacgcccattac
ctcaagctgctgcgcgagtcgcgcccggccgccgattgcccgcccgaccatgaagactgg
aaaaactgggcggcagcggtgctcgaggccttcgacgaattccagttgctctgcgccgtg
cgcaaggggccctggggcgtggaagggctcaacccgcggatcgccgcggccctgcatcgg
cgcagcctgctcgacggcgaccagggctggtacgaaggccgtccggtgctgatgacccgc
aacgactacagcctgggcctgatgaacggcgacatcggcatcgccctgcgcctgcccgaa
ccgcccgagcagcccggcgcgaagccgcagacggtgctgcgcgtggtctttccgcgcaac
gacggctcgggcgggctgcgctgggtcctgcccagccgcctgagcgcggtggagacggtg
ttcgccatgaccgtgcacaagtcccaaggctcggaattcgcccacaccgcgctgatcctg
cccgacaccctcaacccggtgttgaccaaggagctgatctacaccggcatcacccgcgcg
cggcactggttcagcctggtcgagagccgcccaggggtgttcgacgaggcggtgaggcgt
caggtggagcgcaggagcgggctggtggaggcgttggaagggcggccctctcccccggcc
cctctcccgtga
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