Archangium violaceum: JQX13_00130
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Entry
JQX13_00130 CDS
T07137
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K07715
two-component system, NtrC family, response regulator GlrR
Organism
avm
Archangium violaceum
Pathway
avm02020
Two-component system
avm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
avm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JQX13_00130
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JQX13_00130
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
avm02022
]
JQX13_00130
Two-component system [BR:
avm02022
]
NtrC family
GlrK-GlrR (amino sugar metabolism)
JQX13_00130
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
AAA_5
HTH_8
AAA
Mg_chelatase
bpMoxR
AAA_3
AAA_2
DUF7317
OKR_DC_1_N
AAA_16
UBA
UPF0175
AAA_assoc_2
Motif
Other DBs
NCBI-ProteinID:
QRK08639
LinkDB
All DBs
Position
complement(28486..29952)
Genome browser
AA seq
488 aa
AA seq
DB search
MSPSSQPLSSPANRVLVVDDDLELCELISLRLEAQGMRVSIVPTGQQALARVDRGEVDAM
VLDLRLGDADGLEILALARERIPELPVVILTAHGTIETAVEAMRRGAYGFLTKPFQDHEL
VQKLVHALERTTLQREVDDLRRIVAGVPRERLIGGSPAITQVRAHIARVAPSDATVLVLG
ESGTGKELAARLLHGLSRRAHGPFVAVNCGALPPELLESELFGHVKGAFTGATQSREGLF
GAARGGTLFLDEVGEAPPSVQVKLLRVLQERRYTRVGSSTEEEADVRVVAATNRDLREEV
EVRRFREDLYYRLCVVPITMPSLRERPEDIPLLAQLFLERAAAHNGMRVPRLSADALQIL
RDYSWPGNVRELLNVMEAAVLLAASEELRAEHLIHLVQPSPRSEHPSAEESAPGASTPRL
LGTEAPLPTLREARDAFERDYLIEALRRCGGNVSAAARMAGRNRTDFYELLRRHGLSAAD
FKDMSNGR
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgagcccgtcctcccagcccctgtcctctcccgccaaccgcgtgctggtggtggatgat
gacctcgagctgtgtgagctcatctccctgcgcctggaggcacaggggatgcgggtgtcg
atcgtccccacgggccagcaggcgctcgcgcgggtggatcgcggcgaggtcgacgcgatg
gtgctcgacctccggttgggagacgcggatggcctggagattctcgccctggcgcgcgag
cgcatcccggagctgccggtggtcatcctcaccgcgcacgggaccatcgagacggcggtg
gaggccatgcgccggggcgcctatggcttcctcaccaagcccttccaggaccacgagctg
gtgcagaagctggtgcacgcgctcgagcgcacgaccttgcaacgcgaggtggacgacctg
cgccgcatcgtggccggcgttcctcgcgagcggctgattggcggaagtccggccatcacc
caggtgcgtgcgcacatcgcccgggtggcgccgtcggatgccacggtattggtgctcggc
gagtcgggcacgggcaaggagctcgccgcgcggttgctgcatgggctctcccgtcgcgcg
cacgggcccttcgtcgcggtgaattgcggggcgctgcctccggagctgctggagagtgag
ctgttcggccacgtgaagggggccttcaccggcgccacccagtcgcgcgaggggctcttc
ggggccgctcggggcgggacgctcttcctcgacgaggtgggggaggcgcctcccagcgtg
caggtgaagctgctgcgggtgttgcaggagcggcgctacacccgggtgggctcgagcacc
gaggaggaggcggacgtgcgggtggtggcggccaccaaccgggatctccgcgaggaggtg
gaggtgcggcgcttccgcgaggatctctactaccggctgtgcgtggtgccgatcaccatg
ccgtcgttgcgcgagcgcccggaggatattccgctgctggcccagctcttcctggagcgg
gccgcggcacacaacgggatgcgggtgccgcgcctgagcgcggatgccctccagattctg
cgggactactcgtggccgggcaacgtgcgcgagctgctcaacgtgatggaggcagccgtc
ctgctggcggcctccgaggagctgcgggcggagcatttgatccacctcgtgcagccgtcc
cctcgctccgagcacccatcggcggaggagagcgcacccggtgccagcactccccgattg
ctcgggaccgaggccccgctgcccaccctccgcgaggcgcgtgacgccttcgagcgcgac
tacctgatcgaggccctgcgtcgctgcggagggaacgtgagcgccgcggcacgcatggcg
gggcgcaaccgcaccgacttctacgagctgctgcgccggcacggtctgtcggccgcggac
ttcaaggacatgagcaacgggcgttga
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