Archangium violaceum: JQX13_00940
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Entry
JQX13_00940 CDS
T07137
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
avm
Archangium violaceum
Pathway
avm03420
Nucleotide excision repair
avm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
avm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JQX13_00940
03430 Mismatch repair
JQX13_00940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avm03400
]
JQX13_00940
Enzymes [BR:
avm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JQX13_00940
DNA repair and recombination proteins [BR:
avm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JQX13_00940
MMR (mismatch excision repair)
Other MMR factors
JQX13_00940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_22
AAA_11
DUF5021
Motif
Other DBs
NCBI-ProteinID:
QRK08782
LinkDB
All DBs
Position
complement(233449..235842)
Genome browser
AA seq
797 aa
AA seq
DB search
MAPALNAENELLKDLNEPQKEAVLHGDGPLLVLSGAGSGKTRVITRRVAHLVQVRGVFPW
RILAVTFTNKAAREMRERLVQLLGPQAHELVVSTFHSSSSMILRRILRDPTVGADKSLEA
VTGGLTPSFVIYDDGDQLQLVKRAMREVRVDPIMQPREILHRIDQEKNAARLPDDMVVDS
EDLRGMVVQKTYRAYQRLLRAANAVDFGDLLLLLVALFRKRSDVLEQYRRRFQHILVDEF
QDTNPVQYELLRLLAPPERRPNLVVVGDDDQSIYRWRGASVDNILGFPEHFAGARVVKLE
QNYRSDQTILDAAHAVIARNTRRMPKKLWSDRPKGEHLQLMMNRDERAEAQDVARRIHEL
QREGFIKYSGMAVFYRTNAQSRVLEEALRLARVPYTLVSGRSFYDRAEVRDAAAYLRLMV
NPRSDADLLRIINTPARGIGDTTVERLVDWAQQAGVSLYEATAAPERIPGLNTAAVRRLT
GFHAVVSSLYAFAQEAKDAASAVDQMLKESHLVESLVTEGSDESLSRAENLREFLGAAQE
FDLNRAAAAVAAASVGDEEGEEEVPERPLEEESLDDSPLTADVPPLNAFLEQISLVGEAD
AEVGEGRVALMTLHAAKGLEFDAVFITGMEDGVFPHSRALAAEDPDGEEMAEERRLCYVG
FTRARRRLFVSLAQCRSLFGELRYNPPSRFLREVPQSLFGFAEQELETPSPKSTPMVARK
RNWADEDDGPRVDRSYSQTSDMDGVGGDVRGMRVRHEQFGMGRIVSADGNGPNAKVTVEF
GGGVGLKRVIARFLMPG
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctgccttgaacgccgaaaacgaactcctcaaagacctgaacgaaccccagaag
gaagccgtccttcatggggatggcccgctcctcgtgctgtcgggcgcgggcagcggcaag
acccgcgtcatcacccgccgggtggcccacctggtccaggtgcgcggcgtcttcccctgg
cgcatcctcgccgtgaccttcaccaacaaggccgctcgggagatgagggagcggctcgtg
cagctgctcggcccccaggcgcacgagctggtggtgagcaccttccactcctcatcgtcg
atgatcctccgccgcatcctccgggacccgacggtgggggcggacaagtcgctggaggcg
gtgacgggaggactcaccccctcgttcgtcatctacgacgacggggaccagctccaactc
gtcaagcgcgccatgcgcgaggtgcgggtggacccgatcatgcagccgcgggaaatcctc
caccggatcgatcaggagaagaacgcggcgcgcctgccggacgacatggtggtggactcg
gaggacctgcgcgggatggtggtgcagaagacctaccgggcctaccagcggctgctgcgc
gcggcgaacgcggtggacttcggggacctgctgctgctgctggtggcgctcttccgcaag
cgctcggacgtgctggagcagtaccggcggcgcttccagcacatcctggtggacgagttc
caggacaccaacccggtgcagtacgagctgctgcgcctgctggccccgccggagcggcgc
cccaacctggtggtggtgggcgatgacgaccagtccatctaccgctggcgcggggcgagc
gtggacaacatcctgggcttcccggagcacttcgcgggcgcgcgggtggtgaagctggag
cagaactaccgctcggaccagaccatcctggacgcggcgcacgcggtcatcgcgcgcaac
acgcggcgcatgcccaagaagctgtggagtgatcggcccaagggcgagcacctccagctg
atgatgaaccgggacgagcgtgccgaggcccaggacgtggcgcgccgcatccacgagctg
cagcgcgagggcttcatcaagtactcggggatggcggtcttctaccggaccaacgcgcag
agccgcgtgctggaagaggcgctgcggctggcgcgggtgccatacacgctggtgagcggg
cgcagcttctatgatcgggccgaggtgcgggacgcggcggcctacctgcggttgatggtg
aacccgcgctcggacgcggacctgctgcgcatcatcaacacgccggcgcgaggcattggc
gacaccacggtggagcggctggtggactgggcccaacaggcgggggtgagcctgtacgag
gccacggcggcgcccgagcggattccgggcctgaacacggcggcggtgcgccggctcacg
gggttccacgcggtggtgtcctcgctgtacgccttcgcgcaggaggcgaaggacgcggcg
agcgcggtggaccagatgctgaaggagtcgcacctggtggagtcgctcgtgacggagggc
agtgacgagtcgctgtcgcgagcggagaacctgcgcgagttcctgggcgcggcgcaggag
ttcgacctgaaccgtgcggcggcggcggtggcggcggcctcggtgggggacgaggagggt
gaggaggaggtgcccgagcggccattggaggaggagagcctggacgactcgccgctgacg
gcggacgtgccgccgctcaacgcgttcctggagcagatcagtctggtgggcgaggcggac
gcggaggtgggtgaggggcgggtggcgctgatgacgctgcacgcggcgaaggggctcgag
ttcgacgcggtgttcatcacggggatggaggacggggtgttcccgcactcgcgagcgttg
gcggcggaggacccggacggggaggagatggccgaggagaggcggctctgctacgtgggc
ttcacgcgagcgcgcaggcggctgttcgtgagcctggcgcagtgccgctcgctgttcggc
gagctgcgctacaacccgccctcgcgcttcctgagggaggtgccgcagtcgctgttcggc
ttcgcggagcaggagttggagacgccatcgccgaagtccacgccgatggtggcgcgcaag
cgcaactgggcggacgaggacgacgggccgcgcgtggaccgctcctactcacagacgtcg
gacatggacggagtgggtggggacgtgcgtgggatgagggtgcgccacgagcagttcggg
atggggcgcatcgtgtcggcggacggcaacggaccgaacgcgaaggtgacggtggagttc
ggagggggagtgggcctcaagcgagtcatcgcccgcttcctgatgccgggctga
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