Archangium violaceum: JQX13_01495
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Entry
JQX13_01495 CDS
T07137
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
avm
Archangium violaceum
Brite
KEGG Orthology (KO) [BR:
avm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
avm03009
]
JQX13_01495 (rimO)
Enzymes [BR:
avm01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
JQX13_01495 (rimO)
Ribosome biogenesis [BR:
avm03009
]
Prokaryotic type
ribosomal protein modification factors
JQX13_01495 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Peptidase_M32
TraT
Motif
Other DBs
NCBI-ProteinID:
QRK08874
LinkDB
All DBs
Position
355748..357124
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AA seq
458 aa
AA seq
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MMTLGCPKNRVDSEVMLGTLKQRGYSLVQDPAAAQVIVVNTCAFIGPAKQESVDSILEMA
EFKKSGACSTLVVTGCLSQRYGAELSKEMPEVDHFLGTGAYAQIGDLLAAEASPRQVIPD
PDYIHDAKTPRENSMPSYTAYLKISEGCDNACAFCIIPTLRGGQRSRSISDIVAEAQRLS
EQGVQELNLVAQDLTAYGHDLPGKPKLHDLLRELVKVDVRWIRLHYAYPRVFTDELIELM
ATEKKIARYLDMPLQHASDKLLLSMKRGRDSKFLKELLTKLRARVPGLVMRTSMIVGLPG
ETEEDFEMLKEFVKEQRFERLGVFQYSDEEGTAAYDYENKVPKQTIERRWREVMAIQKRI
NREQNKKLVGQRIEVLVEGPSEESEHLLVGRHEGQAPEIDGLVYINDGLAYPGEFVTVEV
TEAHDYDLVAKVVERPNPKDRVHKPRESFPMAVVPSAR
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccctcggctgcccgaagaaccgggtggactccgaggtgatgctcggcaccctc
aagcagcgcggttactcgctggtgcaggatcccgccgcggcccaggtcatcgtcgtcaat
acctgtgccttcatcgggcccgccaagcaggagtccgtggactccatcctggagatggcc
gagttcaagaagtcgggggcgtgcagcacgctcgtcgtcaccggctgcctctcgcagcgc
tacggcgccgagctctccaaggagatgcccgaggtggaccacttcctcggcacgggcgcc
tacgcccagattggcgacctgctcgcagccgaggccagcccgcgtcaggtgattccggac
ccggactacatccacgacgcgaagacgccgcgcgagaactcgatgccgtcctacacggca
tacctgaagatctccgagggctgcgacaacgcgtgcgccttctgcatcatccccacgctg
cgcggtggccagcgctcgcggagcatctcggacatcgtcgccgaggcccagcgcctgtcc
gagcagggcgtgcaggagctgaacctcgtcgcgcaggacctgacggcgtacgggcatgat
ctgccgggcaagccgaagctgcatgaccttctgcgcgagctggtgaaggtggacgtgcgg
tggatccgcctgcactacgcctacccgcgcgtcttcacggacgagctcatcgagctgatg
gcgacggagaagaagatcgccaggtacctggacatgccgctgcagcacgcgagcgacaag
ctgctgctgtcgatgaagcggggccgggactcgaagttcctcaaggagctgctcacgaag
ctgcgcgcccgggtgccggggctggtgatgcgcacctcgatgatcgtcggcctgcccggc
gagaccgaggaggacttcgagatgctcaaggagttcgtgaaggagcagcgcttcgagcgg
ctcggggtgttccagtactcggacgaggaaggcacggcggcgtacgactacgagaacaag
gtgccgaagcagaccatcgagcgtcgctggcgtgaggtgatggccatccagaagcgcatc
aaccgcgagcagaacaagaagctggtgggtcagcggattgaagtgctggtggagggcccg
agcgaggagtccgagcacctgctggtgggccgccacgagggccaggcgccggagatcgac
ggtctggtctacatcaacgacggcctggcctacccgggcgagttcgtcaccgtggaggtg
acggaggcgcacgactacgacctggtggccaaggtggtcgagcgccccaacccgaaggac
cgcgtgcacaagccgcgcgagtccttccccatggccgtggtgccgtcggcgcgctga
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