Archangium violaceum: JQX13_02895
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Entry
JQX13_02895 CDS
T07137
Name
(GenBank) AAA family ATPase
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
avm
Archangium violaceum
Brite
KEGG Orthology (KO) [BR:
avm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
avm03009
]
JQX13_02895
03012 Translation factors [BR:
avm03012
]
JQX13_02895
Enzymes [BR:
avm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
JQX13_02895
5.6.2.5 RNA 5'-3' helicase
JQX13_02895
Ribosome biogenesis [BR:
avm03009
]
Eukaryotic type
Other ribosome biogenesis factors
JQX13_02895
Translation factors [BR:
avm03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
JQX13_02895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_30
Viral_helicase1
AAA_19
SMUBP-2_HCS1_1B
AAA_16
Helicase_RecD
UvrD-helicase
AAA_22
AAA_25
nSTAND3
AAA
bpMoxR
AAA_18
PhoH
PIF1
SLFN-g3_helicase
DEAD
T2SSE
NPHP3_N
UvrD_C_2
RuvB_N
AAA_5
AAA_28
AAA_33
DAP3
AAA_29
ResIII
Motif
Other DBs
NCBI-ProteinID:
QRK09123
LinkDB
All DBs
Position
678455..680377
Genome browser
AA seq
640 aa
AA seq
DB search
MPRDVSFFDSLGRLLALERDAERARMEALAEGMSLQQRAEQGLSFLDLESIEEEVGLGGR
VLVTLARKDRARFPARLDNGDQVAVFPRRSEIKEPARALVARATATRVQLAFDREPPPFV
HEGLLRLDRVPNDVTYERVRAGLSRVKALDKGAARHKREVLLGNEPPRFDSLRELTPTRA
LNPEQHDAVARALAAEDFFLVHGPPGTGKSTVLAEVAAQAVARGQRLLCTAASNAAVDHL
TDLCLDKGLRAIRVGHPARVTPRLQEHTLDLVVEEHPDRVLSRELFDEAFSLLGYARRQR
NQGRSRERFANARASTTEAKSLLDEARALERKALRGVLERAQVVCVTLASLESGILSHEE
FDLALLDEATQATEPLALLGFLRAPKVVLAGDPQQLPPTVLSPEAAKAGLAVSLFERLLA
DHGEGVKRMLREQYRMNTTIMTFPSKEMYGGELRAHPSVADRTLADVLPPDTSVDAPPVL
FLDTAGKGFEEEQEKDTGSLFNTGEADLVVARVKELLAAGLEPRELAVITPYRAQAHALR
ERVEPLSADVEVDTVDAFQGREKDAILVTLTRSNSEGQIGFLSDLRRMNVALTRARRHLF
VVGDSATLSGHPFYARFIESTQEGGGYRSAWEWPDPSEAA
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcgacgtctccttcttcgactcccttggccgccttctcgccctcgagcgcgac
gccgagcgcgcccgcatggaagcgctcgccgagggcatgtccctccagcagcgcgccgag
caggggctctccttcctcgacctggagagcatcgaggaagaggtaggcctcggtggccgc
gtcctggtgacgctcgctcgcaaggacagggcccgcttccccgcccgcctggacaacggc
gaccaggtggccgtcttcccccgccgctccgaaatcaaggagcccgcgcgcgccctcgtc
gcccgcgccaccgccacccgcgtccagctcgccttcgaccgcgagccccctcccttcgtg
cacgagggcctgctgcgcctcgatcgcgtccccaacgacgtcacctacgagcgcgtccgc
gcgggcctctcgcgcgtgaaggcgctcgacaagggagccgcccgccacaagcgcgaggtg
ctcctgggcaacgagccccctcgcttcgactccctccgcgagctcacccccacccgtgcc
ctcaaccccgagcagcatgacgccgtcgcccgagccctcgccgccgaggacttcttcctc
gtccacggcccgcccggcaccggaaagagcaccgtgctcgccgaggtggccgcccaggcc
gtcgcccggggccagcgcctgctgtgcaccgccgccagcaacgccgccgtggatcacctc
accgacctctgcctcgacaagggcctgcgcgccatccgcgtcggccacccggcccgcgtc
acgccccgtctccaggagcacacgttggacctcgtggtggaggagcacccggaccgcgtg
ctctcccgcgagctcttcgacgaggccttttccctgctcggctacgcccgccgccagcga
aaccagggccgcagccgcgagcgcttcgccaacgcccgcgcctccaccaccgaggccaag
agcctcctcgacgaggcccgcgccctcgagcgcaaggccctgcgcggtgtgctggagcgt
gcccaggtggtgtgcgtgacgctcgcaagcctcgagtccggcatcctctcccacgaggag
ttcgacctcgcgctgctcgacgaggccacccaggccaccgagccgctcgccctgctcggc
ttcctgcgcgcccccaaggtggtgctcgctggagatccacagcagctcccgcccaccgtg
ctctcccccgaggccgcgaaggccggtctcgccgtcagcctcttcgagcgcctgctcgcg
gaccacggcgagggcgtcaagcgcatgctccgagagcagtaccggatgaacaccaccatc
atgaccttcccctcgaaggagatgtacggcggcgagctgcgcgcccaccccagcgtggcg
gaccggacgctcgcggacgtgctacctccggacacgagcgtggacgccccacccgtcctc
ttcctcgacaccgccggcaagggcttcgaggaggagcaggagaaggacacgggcagcctc
ttcaacaccggcgaggcggacctggtcgtcgcccgggtgaaggagctgctcgccgccggg
ctcgagccccgggagctcgccgtcatcaccccctaccgcgcacaggcccacgccctgcgc
gagcgcgtggagcccctctccgccgacgtggaggtggacaccgtggacgccttccagggc
cgcgagaaggacgccatcctcgtcaccctcacccgctcgaactccgaggggcagatcggc
ttcctctcggacctgcgccgcatgaacgtggccctcacccgagcgcgccggcacctgttc
gtggtgggtgactcggccacgctcagcggccatcccttctacgcgcgcttcatcgagtcc
acccaggagggcggcggctaccgctccgcctgggagtggcccgatccctccgaagccgcc
tga
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