Archangium violaceum: JQX13_03035
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Entry
JQX13_03035 CDS
T07137
Name
(GenBank) HRDC domain-containing protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
avm
Archangium violaceum
Brite
KEGG Orthology (KO) [BR:
avm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
avm03016
]
JQX13_03035
Enzymes [BR:
avm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
JQX13_03035
Transfer RNA biogenesis [BR:
avm03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
JQX13_03035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
QRK09150
LinkDB
All DBs
Position
708409..709578
Genome browser
AA seq
389 aa
AA seq
DB search
MPTFPQGAQDIVDAPGAHAAARKLEQAEELAVDVEADAMHAFRARLCFLQVGTDEDVYLF
DTLQPGVEPSLLAPVMEDPGRTKFFHAASGDLPYLAEAGVRVRGLFDTHRAATLLGWPKV
GLADLARERLGVELPKEHQQSDFSLRPLPPGMRDYIANDVRYLVELGRQVREACRKADIL
EEVLLDCQRMCDEAAARPDVGADFKPRLPKGGLNPTQLTLANAIAHALHRKRLEWAEAEN
VPMGRMLSNMAISDIAVKPPGNPKELAKAAGVRGAFVRSHGDEVLALVRELLEKSRRGEL
KAEGGEQKGPRDVNRRKREDALKAWRAEKATARKVTPSVVMPNAILDTLVSRPPANLEEM
RAVPYIGDKRVQLYGEELLTLLAQHPVQS
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccttcccacaaggtgcgcaagacatcgtagatgccccgggggcccatgcggcc
gcccggaaactggagcaggccgaggaactggccgtggacgtggaggcggacgcgatgcac
gccttccgggcccggctgtgcttcctccaggtaggcacggacgaggacgtgtacctcttc
gacacgctgcaacccggggtggagccgtcgctcctggcgccggtgatggaggacccgggg
cggacgaagttcttccatgccgcctcgggggacctgccctacctggccgaggcgggagtc
cgggtgcgcggactcttcgatacccaccgggcggccacgctgctggggtggcccaaggtg
gggctggcggacctggcgcgcgagcggctgggcgtggagctgccgaaggagcaccaacaa
tcggacttctcgctgcggccgctgcctccggggatgagggactacatcgccaacgacgtg
cgctacctggtggagctgggcaggcaggtgcgggaggcgtgccggaaggcggacatcctg
gaggaggtactgctcgactgccagcggatgtgcgacgaggcggcggcgcgcccggacgtg
ggagcggacttcaagccgcgcctgccgaaggggggactgaacccgacgcaactgacgctg
gccaacgcgattgcccacgcgctgcaccgcaagcggctggagtgggccgaggcggagaac
gtcccgatggggaggatgctctccaacatggccatctcggacatcgcggtgaagccaccg
ggaaaccccaaggagctggcgaaggcggcgggagtgcgaggcgccttcgtgaggtcgcac
ggggacgaggtgctggcgttggtgcgcgagctgctggagaagtcacgccggggcgagctg
aaggcggagggcggggagcagaagggcccgagggacgtgaaccggcgcaagagggaggac
gcgctgaaggcgtggagggcggagaaggcgacggcgcgcaaggtgacgccgtcggtggtg
atgcccaacgccatcctcgacacgctggtgtcacggcctccggcgaacctcgaggagatg
agggcggtgccatacatcggagacaagcgcgtgcagctctacggagaggagctgctgacg
ctgctcgcccagcacccggtccagagctga
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