Archangium violaceum: JQX13_07435
Help
Entry
JQX13_07435 CDS
T07137
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
avm
Archangium violaceum
Brite
KEGG Orthology (KO) [BR:
avm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
avm03016
]
JQX13_07435 (thpR)
Enzymes [BR:
avm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
JQX13_07435 (thpR)
Transfer RNA biogenesis [BR:
avm03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
JQX13_07435 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
QRK09926
LinkDB
All DBs
Position
1762251..1762808
Genome browser
AA seq
185 aa
AA seq
DB search
MRLFVAVTLGKTIESEATAALQRLKGLAPRVRWVPPANLHLTLSFLGEVEAERLPAVKDA
LMGVGPKHAPLVLTIEGGGSFGSPSHPRVLWAGVGGDTKALGALQADVAGALKPLGFEPE
HREYAAHLTLARAKVPRGDRELAECVRALQDAKWGEARVDRLVLFESLGGQYHSRAEVPL
APTMQ
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctcttcgtcgccgtcacgcttgggaagaccatcgaatccgaggccaccgcggcc
ctccaacgtctcaagggcctggcgcctcgagtgcgctgggtgccgccagccaacctgcac
ctcaccctgagcttcctcggagaggtggaggccgagcggctgcccgccgtgaaggacgcc
ctgatgggcgtgggaccgaaacacgcccccctggtgctgaccatcgagggtggggggagc
ttcggctcgccatcgcatccccgggtgctatgggcgggagtgggcggagacacgaaggcc
ctgggggcgctgcaggcggatgtcgccggagcgctgaagccgctgggcttcgagcccgag
caccgcgagtacgccgcgcacctcacgctggcgcgggcgaaggtcccccggggagaccgg
gagctggccgagtgcgtgcgcgcgctccaggacgcgaagtggggcgaggcacgggtagac
cggctcgtcctcttcgagagcctgggtggccaataccattcgcgcgccgaggtccccctg
gcacccaccatgcagtga
DBGET
integrated database retrieval system
