Archangium violaceum: JQX13_16830
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Entry
JQX13_16830 CDS
T07137
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K02584
Nif-specific regulatory protein
Organism
avm
Archangium violaceum
Pathway
avm02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
avm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JQX13_16830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
avm03000
]
JQX13_16830
Transcription factors [BR:
avm03000
]
Prokaryotic type
Helix-turn-helix
Other families
JQX13_16830
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
GAF_2
GAF
HTH_8
AAA_5
AAA
Mg_chelatase
AAA_2
GAF_EFCB5_1st
HTH_50
bpMoxR
nSTAND3
AAA_16
AAA_3
GAF_3
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
QRK11588
LinkDB
All DBs
Position
complement(3897460..3899007)
Genome browser
AA seq
515 aa
AA seq
DB search
MAKRLDEQTGKHPTLASLLEVSQALAGAQDLRAALHRVLERLERYHGVVRGAVTLMDSDS
KDLYIEASIGLNAEGRTARYKLGEGITGRVVQSGKPIVVPEVSREPLFLHRAFLGRRNSG
QELSFICVPILVHRKTVGALGVDLRFRKDRDYAEETRLFGVIAAMIGQALSAHRLLEDER
KKLLEENTTLRQELRERYDFSNIIGTSGPMRQVYEQIHQVARTTTTVLIRGESGTGKELI
ANAIHYNSTRAKKPFIKVNCAALPETLIESELFGYEKGAFTGAQSRKRGRFELAEGGTLF
LDEIGEINLSTQVKLLRVLQEREFERVGGTETLKVNVRLIAATNKDLETAISEKAFREDL
YYRLNVFTLFIPPLRERKSDLLLLADHFVAKYAREHGKNIRRISTPAIDMLVSYHWPGNV
RELENIIERSVLVCDGNAIHGHHLPPTLQTAEASETHTNTSLTDAVEQFEKDLILDALKS
TRGNRAKAARLLRTTERIVNYKVSKYEIDCSRFRG
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcggttggacgagcagacaggcaagcaccccaccctggcgagcctcctggag
gtcagccaggccctcgccggcgcccaggacttgagggccgccctccatcgcgtcctggag
cgcctcgagcgctaccatggcgtcgtccgcggcgccgtcaccctcatggactcggattcc
aaggacctctacatcgaggcctccattggcttgaacgccgagggccgcaccgcccgctac
aagctcggcgagggcatcaccggccgcgtcgtccagagcggcaagcccatcgtcgtcccc
gaggtcagccgcgagcccctcttcctccaccgcgccttcctcggccgacgcaacagcggc
caggagctctccttcatctgcgtccccatcctcgtccaccgcaagaccgtgggcgccctc
ggcgtggacctgcgcttccgcaaggaccgcgactacgccgaggagacccgcctcttcggc
gtcatcgccgccatgatcggccaggccctctccgcccaccggctcctcgaggacgaacgc
aagaagctcctcgaggagaacaccaccctgcgccaggagctgcgcgagcgctacgacttc
tccaacatcatcggcacctccggccccatgcgacaggtgtacgagcagatccaccaggtc
gctcgcaccaccaccaccgtcctcatccgcggcgagtccggcaccggcaaggagctcatc
gccaacgccatccactacaactccacccgcgccaagaagcccttcatcaaggtcaactgc
gccgccctcccggagaccctcatcgagtccgagctcttcggctacgagaagggcgccttc
accggcgcccagtcccgcaagcgcggacgcttcgagctcgccgagggcggcaccctcttc
ctggatgagatcggtgaaatcaatctctccacccaggtgaagctcctgcgcgtcctccag
gagcgtgagttcgagcgcgtgggcggcaccgagacactcaaggtcaacgtgcgcctcatc
gccgccaccaacaaggacctcgagaccgccatctccgagaaggccttccgcgaggacctc
tactaccgcctcaacgtcttcaccctcttcatcccacccttgcgcgaacggaagtcggac
ctgctcctgctcgcagaccacttcgtcgccaagtacgcgcgcgaacacggcaagaacatc
cgccgcatctccacccccgccatcgacatgctcgtcagctaccactggcccggcaatgtc
cgcgagctggagaacatcatcgagcgctccgtcctcgtctgcgatggcaacgccatccac
ggccaccacctgccccccaccctccagaccgccgaggcctccgaaacccacaccaatacc
tccctcaccgacgccgtcgagcagttcgagaaggatttgatcctcgacgccctcaagagc
acccgcggcaatcgcgccaaggccgctcgcctcctgcgcaccaccgagcgcatcgtcaat
tacaaggtctccaagtacgagatcgattgctcccggttccgtgggtga
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