Archangium violaceum: JQX13_20610
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Entry
JQX13_20610 CDS
T07137
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
avm
Archangium violaceum
Pathway
avm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
avm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JQX13_20610 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avm03400
]
JQX13_20610 (ung)
Enzymes [BR:
avm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
JQX13_20610 (ung)
DNA repair and recombination proteins [BR:
avm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JQX13_20610 (ung)
Prokaryotic type
JQX13_20610 (ung)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
P4Ha_N
Motif
Other DBs
NCBI-ProteinID:
QRK13724
LinkDB
All DBs
Position
4793065..4793739
Genome browser
AA seq
224 aa
AA seq
DB search
MKDRLPADWKKVLKDVLEGPEFAELEAFVARERREHTVYPSEEDLFSAFRLTPYEKVKVL
LLGQDPYHGPGQAHGLAFSVQPGVKPPPSLVNIFKELQSDLGVPRPKEGSLVPWAEQGGL
LLNAVLTVREGQANAHEGHGWEHFTDAVIQKVSDKEDTVVFILWGSYAQKKEALIDTTRH
VILKAPHPSPLSAKKGFFGSKPFSKTNEVLEERGRGAIDWRLPS
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaccggctgccggcggactggaagaaggtgctgaaggacgtgctggagggcccg
gagttcgcggagctggaggcgttcgtggcgcgggagcggcgcgagcacacggtgtacccc
tccgaggaggatctgttctcggccttccggctgacgccgtacgagaaggtgaaggtgctg
ctgctcggacaggacccgtaccacgggccggggcaggcgcacgggttggccttctcggtt
cagccgggagtgaagccaccgccctcgctggtgaacatcttcaaggagctgcagagcgac
ctgggcgtgccgaggccgaaggagggctcgctggtgccgtgggcggagcagggggggctg
ctgctcaacgcggtgctgacggtgcgcgaggggcaggccaacgcccacgagggacacggt
tgggagcacttcaccgacgcggtcatccagaaggtgagcgacaaggaggacacggtggtg
ttcatcctctggggcagctacgcgcagaagaaggaggcgctcatcgacaccacccggcac
gtcatcctgaaggcaccgcacccctcgccgctgtcggcgaagaagggcttcttcggcagc
aagcccttcagcaagaccaatgaggtgttggaggagcgggggcgcggcgccatcgactgg
cggctgccgtcgtag
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