Archangium violaceum: JQX13_22135
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Entry
JQX13_22135 CDS
T07137
Name
(GenBank) lamin tail domain-containing protein
KO
K20276
large repetitive protein
Organism
avm
Archangium violaceum
Pathway
avm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
avm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JQX13_22135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4215
LTD
Amidohydro_1
Amidohydro_3
TSP_3
Vault_4
FctA
Motif
Other DBs
NCBI-ProteinID:
QRK12485
LinkDB
All DBs
Position
5154718..5159346
Genome browser
AA seq
1542 aa
AA seq
DB search
MRNNPRHLLALLSTGLLLLTACPGTEPAVCGDGRVEGKEQCDDGNTADGDSCSSQCTTTT
PPGDAICGNGQVEVGELCDDGNTVNGDGCQNNCVPTPPGQEILHECGNGIREIGEACDDG
NKDDGDECTSTCTLPPAPMEQCPGAASLPQPEAGATCTVIPASTANGARLYMGVVLMDGK
TLNGGQVLVNAEGTITCAACDCSGEAEAAGAERISCPAGVISPGLINANDRISVQLTPET
GSLERYEHRYDWDRGNDGHTALTTPRDATEDVVRWGELRQVMAGTTSLAGNGGRTGLLRE
LAASQWSTSFSQEGLREPSLTFERAPLGDSSGKELTSGCDYPSIKTPDDIPALAAYLANV
AEGIEESAHNEFRCVSGQGEDSEDLLTSRTAVLHGMALTAAEISKLAERGTSLVWSPRAN
VSLYGDTSMVTAYKQLGVNIALGTHRLQLGSMNLLRELQCANYLNQTHYSQAFTDEELWR
MVTANAADATETWEKVGRIAKGKVADLAIYRLNSFAKSPHRAVIAANPEDVVLTVRGGKP
LYGDKAVVDALTVGAEKACEEVPVCGTTKAACVESETGKTFAVLKEANKTSYPLFFCADS
QPTNEPTCEPQRTATTPPASVNGSNVYTGTRRLTDYDGDGIENAQDNCPIIFNPIRPMDN
GKQADTDNDGLGDACDPCPLDAGSTTCSARNPTDADGDGIPVPVDNCPGVANPDQADMDG
DGRGDVCDACRTADPDDVLCPVTIYDLKKPVEGKYPFRAYTVTIPSAIVTAVSGSSYFIQ
VDDETRAKGGVDWSGIFVYSSNRTPKVGQRIRVENAVLKLYYGQLELVNAFITVLDGDLI
HEVPAPVSVIPDEVVTGGSRAEALEGVLVQLTDVVVTKQDAAYGEFFVNTKGSSTDGVYV
DDFLYKVSPLPAVGTEFYRVRGVLTWRNNNSKLEPRNADDLLGPPPALVGFGPAGLFTRV
DPACAPAGCSTLGGLLTVSVASPYPDDLEVVVASSNPGALEVANGGTVVIPKGQSSAEVK
LIAKAQAASVTLTAQLGTVRLENTVRVLAANELPAPTALTPNPVVTAPGYDVTLTATLDI
PAPAGTTLEVVVTPAEIGTVEPSTVAVGTDATTASFVFSANPAAPVTASGSISVRVSGGT
SEVSTPVNFTDDFPKLISLTPSTATVVQGTIQKFTVTLNKVAEGDVAVKLAAASSPAGAA
FGTVPATVVVPMGSDSATFDFTADAAGDIAGTVTAALGADTLTANVTVRTPYPMLASISP
TNPRVVPGATQEFTVSLDKAAEAGGATISVSLEPATGLGSLGSSTVFIAEGSTSGTVTFT
ATTSTDGASGTFVATYDGTTLSTPVTVSGTRRGLVINEVDYDMPGAGDSEEFVEIYNSSS
ASISLADLALVFVNGNNNTEYLRADLASIGELGAGEYLVVGSAKLIAKVPVSPSVKTLAI
KSSSNAETDIIQNGSPDGVAIYNKATDSIVDSLAYEGDMQDCTLKETTTTFDLMEGTTPT
TSLADSSSAGSLSRIPNAQDSDSNMDDFKLTAAPTPGAPNAP
NT seq
4629 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaacaacccacgccatctcctggcactgttgagtacaggactcctcctgctcaca
gcgtgcccgggtactgagcccgctgtgtgcggcgacggccgcgtcgaaggcaaggagcaa
tgtgacgacggcaacaccgccgacggcgatagctgttccagccaatgcaccaccaccacc
ccccccggcgatgccatctgcggcaatggtcaggtcgaggttggtgagttgtgtgacgac
ggcaacaccgtcaacggcgatggctgccagaacaactgcgtccccaccccgccgggccag
gagatcctccacgagtgcggcaacggcatccgggagatcggggaggcctgcgatgacggc
aacaaggatgacggtgacgagtgcacgagcacatgtacgctcccgccggcgccgatggag
cagtgccccggggcggcgagcttgccccagccggaggcgggcgccacctgcacggtgatt
cccgccagcaccgccaatggcgcgcgcctctacatgggcgtggtgctgatggacggcaag
acgctgaatggaggccaggtgctggtgaacgccgagggcaccatcacgtgcgcggcgtgc
gactgctcgggtgaggcggaggccgccggagccgagcgcatctcctgcccggcgggtgtc
atctccccgggcctcatcaacgcgaacgaccgcatcagcgtccagctgacgccggagacc
gggtcgctcgagcgctacgagcaccgttatgactgggaccggggcaacgatggccacacc
gcgctgaccacgccccgcgacgcgaccgaggatgtcgtgcgctggggcgagctgcgccag
gtgatggctggcacgacctcgctcgccggtaatggcggcaggacgggcctgctgcgcgag
ctggccgcctcccagtggtccaccagcttcagccaggagggcctgcgcgagccgagcctg
accttcgagcgcgctccgctcggtgacagcagtggcaaggagctgacgagcgggtgtgac
tacccgtccatcaagacgccggatgacatcccggcgctcgcggcctacctggcgaacgtg
gccgagggcatcgaggagtcggcgcacaacgagttccgctgcgtgtccggccagggcgag
gacagcgaggacctgctgacctcgcgtacggccgtcctccacggcatggccctcacggcg
gcggagatctccaagctggccgagcgtgggacgagcctcgtctggtcgccccgcgccaac
gtgtccctgtacggcgacacgtccatggtcaccgcctacaagcagctgggcgtgaacatc
gcgctgggcacgcaccggctgcagctgggctccatgaacctcctgcgcgagctgcagtgc
gcgaactacctgaaccagacgcactactcgcaggccttcacggacgaagagctgtggcgg
atggtcaccgcgaacgccgcggacgcgacggagacctgggagaaggtgggccgcatcgcc
aaggggaaggtggcggacctggccatctaccggctcaactccttcgcgaagtcgccgcac
cgcgccgtcatcgccgccaatccggaggacgtggtcctcaccgtgcgcgggggcaagccg
ctctacggtgacaaggccgtggtggacgcgctgacggtgggcgccgagaaggcctgtgaa
gaggtgccggtgtgcggcaccaccaaggcggcgtgcgtggagtcggagacggggaagacc
ttcgccgtgctgaaggaggccaacaagacgtcctacccgctcttcttctgcgccgattcg
cagccgacgaacgagcccacctgcgagccgcagcgcaccgctaccaccccgccggcctcg
gtgaacggctccaacgtctataccggcacgcgccggctcaccgactacgacggtgacggc
atcgagaacgcccaggacaactgccccatcatcttcaaccccatccgcccgatggacaac
ggcaagcaggcggataccgacaacgacggactcggtgatgcgtgcgatccctgcccgctc
gacgccggctccacgacgtgctcggcccgcaatccgacggacgcggacggcgatggcatt
ccggtgcccgtcgacaactgccccggtgtcgccaacccggatcaggcggacatggatggc
gacggtcgcggtgatgtgtgcgacgcctgccgcacggcggacccggacgacgtgctctgc
ccggtcaccatctacgacctcaagaagccggtggagggcaagtacccgttccgcgcctac
acggtcaccattcccagtgcgatcgtgacggccgtgtcgggtagcagctacttcatccag
gtcgatgatgagacgcgggccaaggggggggtggattggtccggtatcttcgtctactcc
tcgaatcgcacgcccaaggtcggtcaacgcattcgcgtcgagaacgccgtgctgaagctg
tactacgggcagctcgagctcgtgaacgccttcatcacggtcctggatggcgacctcatc
cacgaggtgccggcgcccgtctccgtcatcccggacgaggtagttacgggtggctcgcgc
gccgaggccctcgagggcgtgctggtgcagctcaccgacgtcgtcgtgacgaagcaggac
gccgcctatggcgagttcttcgtcaacaccaaggggagcagcacggatggggtgtacgtg
gatgacttcctctacaaggtctcgcccctgccggcggtgggcacggagttctaccgggtt
cgtggcgtgctgacgtggcgcaacaacaactccaagctggagccgcgcaacgcggacgat
ctgctcggccccccgccggcactcgtcggcttcggccccgctggcctcttcacccgcgtg
gaccccgcgtgcgctcccgccgggtgctccaccctgggcgggttgctcactgtctccgtg
gccagcccctaccccgatgatctcgaggttgtcgtcgcctcttccaatccgggtgcgctg
gaggtcgccaatggcggcacggtggtcatccccaaggggcagagcagcgccgaggtgaag
ctcatcgcgaaggcccaggccgccagtgtgacgctgaccgcccagctgggcacggtgcgc
ctggagaacacggtgcgcgtgctggccgccaacgagctgcccgcacccacggcgctcacg
cccaaccccgtcgtcacggcgccgggctacgatgtgacgctcaccgccaccctggacatc
ccggcgcccgcgggaaccacgctcgaggtcgtcgtcacgccggccgagatcggcacggtg
gagccctcgacggtggccgtcgggaccgacgccaccacggccagcttcgtcttcagtgcc
aatccggcggcgcctgtcacggcctcgggctccatctcggtccgggtgagtggcggcacc
agcgaggtatcgaccccggtcaacttcaccgacgacttcccgaagctcatcagcctgacg
ccgtctacggccaccgtcgtgcagggcacgatccagaagttcacggtgacgctgaacaag
gtggcggagggtgacgtggcggtgaagctcgcggcggcgtccagcccggcgggggctgcc
tttggtaccgtgcccgccacggtggtggtgcccatgggcagtgactcggccaccttcgac
ttcaccgcggatgccgcgggcgacatcgcggggaccgtgacggccgcgctcggtgcggac
acgctcaccgccaacgtgacggtgcgcacgccgtacccgatgctcgccagcatcagcccg
acgaatccgagggtggtgccgggggcaacgcaggagttcaccgtgtcgctggacaaggcg
gcggaggccggtggtgccacgatctccgtctccctggagcccgcaaccgggttgggctcg
ctcggctcctcgacggtcttcatcgccgagggtagtacctcgggcacggtgacgttcacc
gccaccaccagcacggatggggcgagcggcaccttcgtcgccacctacgatggcacgacg
ctctccactccggtgacggtgtccggcaccaggagggggctcgtcatcaacgaggtggac
tacgacatgcccggagccggcgattcggaggagttcgtggagatctacaactcctcgagt
gcgtccatctcgctggccgatctggctctcgtcttcgtcaacgggaacaacaacaccgag
tacctcagggccgatctggcctcgatcggcgaactgggggcgggtgagtacctcgtcgtc
ggttcggccaagctcatcgccaaggtgcccgtcagcccctcggtgaagacgctcgcgatc
aagtccagctccaatgccgaaacggacatcatccagaacggctcgcccgatggcgtggcc
atctacaacaaggcgacggactcgatcgtcgactcgttggcctacgagggcgacatgcag
gattgcacgctcaaggagacgacgacgacgttcgatctgatggagggcaccacgcccacc
accagcctggctgattcgtcgagcgctggctcgctgtcccgcattcccaatgcgcaggac
tccgactcgaacatggacgatttcaagctgacggccgcgcccactccgggcgcaccgaac
gctccttga
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