Archangium violaceum: JQX13_24375
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Entry
JQX13_24375 CDS
T07137
Name
(GenBank) OmpA family protein
KO
K20276
large repetitive protein
Organism
avm
Archangium violaceum
Pathway
avm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
avm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JQX13_24375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_13
Big_6
OmpA
TSP3_bac
Glucodextran_B
DUF11
DUF3344
HYR
Motif
Other DBs
NCBI-ProteinID:
QRK12891
LinkDB
All DBs
Position
complement(5675934..5682281)
Genome browser
AA seq
2115 aa
AA seq
DB search
MRTPFPPTPAERRGLAALTSAPTLLLALLVLLTAGRAQAQAPTNDADPKLRYWSDQYGNF
ALIGNTLGQDCRSTTPRPLVGTTPPNEAVYGERSCSQRDTSPDFFWTLDDWTVENTGAAT
RPYLFLTDGSTPVTPPPDPLKARSQAVLTLPPGARVTYARLYWAATRFNASAGDKVQAPD
LTAILSRPGVAGFEKSLTADDYAFQYDGVTEYQYQSTADITNLVKAYGPGAYQVSDVLAL
PLDTTSGEYLFDAWWMVVFYEEPGANKRHLKLFDSMRVVAGAPGTTVALSGFHVPAYAQD
AKLGVIAFEGDDPEPDINDTFEFNGKLLSNDLNPANNFFNSTRSWTTQKSTVRTDTPLGG
LDAGTDGVLDTLPVSHRYDRPQLTGTPGSMSGMDLDVVDVTVAAGTKSATVRVNTSGDKF
WLGGFVTSITTQAPDFTNTVKSARNLSRADGTVRPGDIIEYTISTINVGDDHSRDTVLID
VLPAQLEYVPESIKVLTVAASDTATPGPRTDAKGDDVAWYDAATRTLTVHLGTGATASKG
GSLKGIVIPGDVGESTSISFQVKVKPAIEGKVENQAFIEAGGMLGIDPVRTPSHSPSGSG
PTAFEVAIVPVPVISTPANGSYTTDNTPTYSGTALPGTTITVKDSAGRVLCTAAVTSSGT
WSCTGSTPLSEGPHTVTAVATDSAGNPSQPATTTFTVDTVAPAPPVITEPPSGAELPVQR
PLFIGTAEPNSTVIVSVDGKVIGRVVADASGNWSLQAPEPLLDGPHTVGARAQDAAGNIS
TATNVPFTIAADPPDTKITAQPPLKTSSTTATFEFTAPPDRYDIGGYDCSLDGRTFVPCT
SAKTYTELPEGRHTFAVRARTYNGVVDPTPATYTWLIGVDTDNDGIADSIERATGTDPND
DDSDDDGLLDGNEDANGDGFVDLGETDPRKRDTDGDGIQDGTEKGLRTPQGLGTNGAIFQ
RDEDPTTTTDPLDRDTDDGGVSDGAEDFNYNGRIDSGESDPNDKADDKLTADSDGDGISD
SIEKATGTDPDDDDSDDDGILDGNEDTNHNGIVDPGELDPRTRDSDHDGLQDGTEKGLTM
PQGSGTSTSIFEPDTDPATTTNPLDDDSDDDGLLDGNEDANHDGHTGTSETSPNKADTDG
DGLQDGTEKGLTSPQGSGTDETVFQSDLDPTTQTNPLDPDTDKGGVSDGSEDLNHNGRID
TSLGETNPLDPKDDVVPADTDNDGLPDSLEMVSGTDPNDDDSDDDGILDGNEDANHDGDV
DPGETDPREIDTDGDGLQDGTEKGLSSPEGLGTDLAVFQPDADPSTRTDPLKADTDGGGT
SDGSEDTNHNGAVDTGETNPLDPKDDRDTDGDGIADEVEVDAGLDPNDSDSDDDGVIDGE
DGLTDTDKDGKIDALDPDSDNDGINDGTERGVTRDTAPAGTNIDSPNFVPDADPSTTTDP
KKADTDRDGLKDGDEDKNHDGRLDSDETAADDADTDDGGIPDGEEVWNNTNPRDDTDDFR
IVGRGCSTAGGGAPFVWLAALMLAVPMMRSRRSSRRGTAVAGGLLGLLGVLSAPAADAQA
PTPSPLSQAIDVQRYKPGPGATDILGVHGARVDEHLGWHLGASLNYASNPLGVLDPRQDD
FVYDIVANQVTVDLMGSISLWNRFELGVALPLTYQSSESGAAVTPVFQNGVSGGGVGDLR
LVPKAHLLTVGGFDLGLVVPVLLPSAGGNGFRGGAGVSARPQLVGEWGNGNGLRVVANLG
ANLQPAQQVRNLHTGNELMYAVGAQVPFSEKLALRATLAGAYGLNEPDMEGRPLEFLAAL
QYRINPGLAAHVGGGPGITRGYGTPGFRVFAGLDWTQPGERASAPATQVDTDGDGVGEGS
ANIQDTCPNEAEDKDGFEDEDGCPDPDNDKDGILDAQDKCPLQPETVNGFEDADGCPDKE
PVDTDKDGLMDHQDKCPTQPEDNDGFQDEDGCPDPDNDKDGVPDWEDQCPMQPEVINGVK
DEDGCPDEGESKVRLESKRIVILDKVYFATTKDVILPRSFDLLKQVASVLRANPQIQLLR
VEGHTDGQGGSVSNLKLSQRRAANVRAFLIREGIAAERLESVGYGQEKPVDSNKTAAGRE
NNRRVEFNILKMAGE
NT seq
6348 nt
NT seq
+upstream
nt +downstream
nt
atgcgaactcctttcccgccaaccccggccgaacgccgtggcctcgcggcgctgacgtcc
gcgccaacgctgctgctggcactcctggtgttgctgacggccggccgcgcgcaggcccag
gcccctaccaatgacgcggaccccaagctgcgctactggagcgaccagtacggcaacttc
gcgctcatcggaaacacgctcgggcaggactgccgcagcacgacaccccggccgctcgtc
ggcacgacgccgcccaatgaagccgtgtacggggagcggagctgctcccaacgcgatacc
tccccggacttcttctggaccctggatgactggacggtcgagaacaccggagccgccacc
aggccctatctcttcctgaccgatggcagcacccccgtcacgcctccccctgatcccctg
aaggcccgctcccaggcggtgctcacccttcccccgggggcaagggtcacgtacgcgcgc
ctctactgggcggccacccgcttcaacgcatcggcgggcgacaaggtccaggcgccggac
ctcaccgccatcctgtcccggcctggcgtggccggcttcgagaagtccctcaccgccgac
gactacgccttccagtacgacggggtcacggagtaccagtaccagtccacggcggacatc
acgaacctcgtgaaggcctacggtccgggtgcctaccaggtcagtgacgtgctggccctt
cccctcgacaccacgagcggcgagtacctcttcgacgcctggtggatggtggtcttctac
gaggagccgggcgcgaacaagcggcacctgaagctcttcgacagcatgcgggtcgtggcg
ggcgcgcccggcaccaccgtcgccctctccggcttccacgtgccggcctatgcccaggac
gccaagctgggcgtcatcgccttcgagggtgatgatcccgagccggacatcaacgacacg
ttcgagttcaacggcaagctgctcagcaacgacctcaaccccgcgaacaacttcttcaac
agcacgcgctcctggaccacccagaagagcaccgtgcgcacggacacaccgctcggaggg
ctcgacgcgggcaccgacggggtgctcgacaccctcccggtgagccacaggtacgaccgt
ccccagctcaccggcacgcccggaagcatgtccggcatggacctggacgtggtggacgtc
acggtggccgcgggcacgaagtcggccacggtgagggtcaacaccagtggtgacaagttc
tggctgggcggcttcgtcacctccattaccacccaggccccggacttcaccaacaccgtc
aagtcggctcgcaatctcagccgcgccgatggcacggtccgccctggcgacatcatcgag
tacaccatctccaccatcaacgtgggcgatgaccactcccgggacacggtcctcatcgac
gtgctgcccgcgcagctcgagtacgtcccggagtccatcaaggtcctcacggtggcggcg
agcgacaccgcaactcccggtccccgcaccgacgccaagggggatgacgtcgcatggtac
gacgccgccacccggaccctcaccgtccatctgggaacgggagccacggccagcaagggc
ggcagcctgaagggcatcgtgattcccggggatgtgggcgagagcaccagcatctccttc
caggtgaaggtcaagcccgccatcgagggcaaggtggagaaccaggccttcatcgaggcc
ggaggcatgctgggcatcgatccggtgagaacgccctcgcatagcccgagcggtagcggg
cccacggcgttcgaggtcgccatcgtcccggtgcccgtcatcagcacgcccgcgaatggc
tcctacaccacggacaacacgcccacgtacagcgggacggccctgccgggaaccacgatc
accgtgaaggattcggctggcagggtcctctgcaccgccgccgtcacgtcctccggcacc
tggtcctgcacggggagtacgccgctgagcgagggcccccacaccgtcaccgcggtggcc
acggacagcgcgggcaatccgagtcaaccagcgaccaccaccttcacggtggatacggtg
gcacccgctccgcccgtcatcaccgagcccccctccggcgccgagctccccgttcagcgt
cccctgttcatcggtaccgccgaacccaactccacggtcatcgtgagcgtcgacggcaag
gtcatcggccgggtggtggcggatgcctcgggcaactggtcgctccaggccccggaaccg
ctcctggacggtccgcacaccgtcggcgccagggcgcaggacgcggcgggcaacatcagc
accgcgaccaacgtccccttcaccatcgcggcggacccgcccgatacgaagatcaccgcc
cagccgccgctcaagacctcgagcaccacggccaccttcgagttcaccgccccccccgac
aggtacgacatcggcggctatgactgcagcctcgacggccgtaccttcgtgccgtgcacc
agtgcgaagacctacacggagctgcccgagggtcgccacaccttcgccgtgcgcgcccgg
acctataacggcgtcgtggaccccactccggccacctacacctggctcatcggtgtcgac
accgacaatgacggcatcgccgacagcatcgagagggccaccggcaccgacccgaacgat
gacgactccgacgatgacggcctcctggacggcaatgaggacgccaacggagacggcttc
gtggatctgggtgagaccgacccgcgcaagcgcgacacggatggtgatggcatccaggac
ggcaccgagaagggcctgcgcacgccccagggcctgggcaccaacggggccatcttccag
cgcgatgaggaccccaccaccacgacggacccgctcgacagggacaccgatgacggcggc
gtgtccgacggtgcggaggacttcaactacaacggccgcatcgactccggtgagtcggat
cccaacgacaaggcggacgacaagctcacggccgactcggatggtgatggcatttccgac
agcatcgagaaggccaccggcaccgacccggacgatgacgactccgatgacgacggcatc
ctggacggcaacgaggacaccaatcacaacggcatcgtggacccgggcgagctcgatccg
cgcacgcgtgactcggaccacgacggtctccaggacggcaccgagaagggtctgaccatg
cctcagggctcgggcaccagcacgtccatcttcgagcccgatacggaccccgccaccacg
accaatccgctcgacgacgactcggatgacgacggcctcctggacggcaacgaggacgcc
aaccacgacggacacaccggcaccagcgagaccagcccgaacaaggccgacacggatggc
gatggcctccaggacggcaccgagaagggcctgacctcgccccagggctcgggcaccgac
gagaccgtcttccagtccgacctggacccgaccacccagacgaatccgctcgacccggac
accgacaagggcggcgtgtccgatggttcggaggacctcaaccacaacggccgcatcgac
accagcctcggcgagaccaatccactcgaccccaaggacgacgtcgttcccgccgacacg
gacaatgacggcctccccgacagcctggagatggtctccggcaccgacccgaacgatgac
gactcggacgacgacggcatcctggatggcaacgaggacgccaaccacgacggcgatgtg
gacccgggcgagacggatccgcgcgagatcgacacggacggcgacggcctccaggacggc
accgagaaggggctctcctctcccgagggcctgggcaccgacctggccgtcttccagccc
gacgcggacccctccacgagaacggatccgctcaaggcggacaccgatggcggtggcacg
agcgatggctcggaggacaccaaccacaacggcgccgtggacacgggcgagacgaatccg
ctcgaccccaaggacgacagggacacggatggtgacggcatcgccgacgaggtcgaggtg
gatgccggcctcgatccgaacgactcggatagcgatgacgacggcgtcatcgatggcgag
gacggcctcaccgacacggacaaggatggcaaaatcgacgcgctcgacccggacagcgat
aacgacggcatcaacgacggcaccgagcgcggtgtgacgcgagacaccgctcccgcgggc
accaacatcgactcgcccaacttcgtgccggacgcggacccgtccaccacaaccgacccg
aagaaggccgacaccgacagggacggcctgaaggacggtgacgaggacaagaaccacgac
ggccgcctcgactcggacgagaccgccgcggacgacgcggacaccgacgacggcggaatc
ccggacggtgaagaggtgtggaacaacaccaacccacgggacgacacggacgacttccgc
atcgtcggccgtggctgcagcaccgcgggtggtggcgctccgttcgtgtggctggcggcg
ctgatgctcgccgtgccgatgatgcgctcgcggcgctcctcgcgccgtggcaccgcggtg
gccggtgggctgctggggctcctgggtgtgctgtccgctccggcggcggacgcccaggct
cccaccccgtccccgctgtcccaggccatcgacgtgcagcgctacaagcccggcccggga
gccacggacatcctcggcgtgcacggcgcccgggtggacgagcacctcggctggcacctg
ggagcctcgctcaactacgcgagcaatcccctcggcgtcctcgacccgcgccaggatgac
ttcgtctacgacatcgtcgccaaccaggtgacggtggacctgatgggctccatctcgctg
tggaaccggttcgagctgggcgtggcgctgcccctcacgtaccagtcctccgagagcggc
gccgccgtcacgcccgtcttccagaacggggtgagcggcggaggcgtgggcgacctgcgg
ctggtgcccaaggcgcacctgctaacggtgggcgggttcgacctgggtctggtcgtcccc
gtcctgctgccctccgcggggggcaatggtttccgcggcggcgcgggcgtgagcgcgcgg
ccccagctcgtgggcgagtggggcaacggcaacggcctgcgagtggtggccaacctgggc
gccaacctccagcccgcgcagcaggtgcgcaacctgcacacgggtaacgagctgatgtac
gcggtgggtgcccaggtgcccttctccgagaagctcgcgctccgcgccaccctcgcgggc
gcgtacgggctgaacgagccggacatggaggggcgtccgctggagttcctcgcggcgctg
cagtaccgcatcaatccggggctggcggcgcatgtgggcggtggcccgggcatcacccgt
ggctacggcaccccgggcttccgcgtcttcgccggcctcgactggacccagcccggtgag
cgtgcatccgctcccgccacccaggtcgacacggatggggacggcgtcggagagggctcc
gcgaacatccaggacacgtgccccaacgaggccgaggacaaggatggcttcgaggacgag
gacggctgcccggatccggacaacgacaaggacggcatcctggacgcccaggacaagtgc
cccctgcagcccgaaacggtgaacggcttcgaggacgccgacggctgcccggacaaggag
ccggtggacacggacaaggacgggctgatggaccaccaggacaagtgcccgacccagccc
gaggacaacgacggcttccaggacgaggacggttgcccggatccggacaacgacaaggac
ggcgtgccggactgggaggaccagtgccccatgcagcccgaggtcatcaacggagtgaag
gacgaggacggctgccctgacgagggcgagtccaaggtgcgcctggagtccaagcgcatc
gtcatcctggacaaggtctacttcgccaccaccaaggacgtcatcctgcccaggtccttc
gacctgctgaagcaggtggcgtcggtgctgcgcgccaacccgcagattcaactgctgcgc
gtggagggccatacggacggccagggcggctccgtcagcaacctgaagctgtcgcagcgc
cgcgcggccaacgtgcgcgccttcctcatccgcgagggcatcgccgcggagcgtctcgag
tcggtgggctacgggcaggagaagcccgtggacagcaacaagacggcggccggccgtgag
aacaaccgccgcgtggagttcaacatcctgaagatggccggagagtag
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