KEGG   Archangium violaceum: JQX13_25155
Entry
JQX13_25155       CDS       T07137                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K13599  two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
avm  Archangium violaceum
Pathway
avm02020  Two-component system
Brite
KEGG Orthology (KO) [BR:avm00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    JQX13_25155
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:avm02022]
    JQX13_25155
Two-component system [BR:avm02022]
 NtrC family
  NtrY-NtrX (nitrogen regulation)
   JQX13_25155
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_lid_14 HTH_8 AAA_5 HTH_50 AAA_16 Mg_chelatase IstB_IS21 AAA HTH_1 MCM AAA_22 nSTAND3
Other DBs
NCBI-ProteinID: QRK13025
LinkDB
Position
complement(5854527..5855915)
AA seq 462 aa
MQSPVAAPRPQASGPRILLVDDDPGVLKGLRGLLSDEGFSPVEARSAAEAVRLLDAPGQP
PALMLLDLRMPGETGLELLARLPRPLPLPVVVLSGEASPAEAVQALKLGATDFVEKPPSP
ERLLTALRNALALSELREEQQRLREELARPGHLVGDSPAMESLRALIARVGPSDTAILIT
GETGTGKERVARALHLASGRKGRLVAVNCAAIPATLLESELFGHERGAFSGATTRRLGRI
EQAQGGTLFLDELGDMPLELQAKLLRVLETKEVERLGGGLPIPVNVRILAATHRDLARAV
REGSFRQDLYFRLNVLPLSLPPLRERPEDILPLARAFAAELAGPNVPLELAPGAEDALRA
WPWPGNVRELRNFIERQNLLRGNGPLTLTPESLTGPTPLKAATPSRLVLGQKSYREHVDD
FERTLIKAALEEGGSIAGAARLLQVDRGNLHRRIKALGIPAA
NT seq 1389 nt   +upstreamnt  +downstreamnt
gtgcaatcccctgtcgccgctccgcgccctcaggcgtccggcccgcgcatcctcctggtg
gatgacgacccgggcgtcctcaagggactgaggggcctgctgtccgacgagggcttctcc
cccgtggaagcccgctccgccgccgaggccgtccgcctgctcgacgcgcccggccagcca
ccagcgctgatgctgctggacctgcgcatgcccggagagacgggactggagctgctcgcg
cggctgccccggccccttcccctcccggtggtggtgctctccggagaggcctcgcccgcc
gaggccgtgcaggcactgaagctgggcgccaccgacttcgtggagaagccgccctcgccc
gagcggctgctcacggcgctgcgcaacgccctcgccctgagcgagctccgggaggagcag
cagcgcctccgggaggagctggcccgccccggccacctcgtgggggacagtccggccatg
gagtcattgcgcgcgctcatcgcacgcgtgggcccgagcgacacggccatcctcatcacc
ggcgagacgggcacgggcaaggagcgcgtggcgcgggcgctccacctggcctccgggcgc
aaggggcgactggtcgcggtcaactgcgccgccatccccgccacgctgctggagagcgag
ctgttcggccacgagcgtggtgccttctcgggagccaccacgcggcggctcggccgcatc
gagcaggcgcaggggggcacgctgttcctcgacgagctcggggacatgccgctggagctc
caggccaagctgttgcgcgtgctggagacgaaggaggtggagcggctgggcggagggctg
cccatccccgtgaacgtgcgcatcctcgcggccacgcacagggacctcgcgcgggcggtg
cgggaggggagcttccggcaggatctgtacttccggctgaacgtgctccccctgtccctt
ccgcccctgcgcgagcggcccgaggacatcctccccctggcgagggccttcgccgcggag
ctggccgggccgaacgtcccgctggagctcgcacccggagccgaggatgccctgcgcgcc
tggccctggcccggcaacgtgcgcgagctgcgcaacttcatcgagcgccagaacctcctg
cgaggcaatggcccgctcaccctcacccccgaatccctcaccggccccacgcccctgaag
gccgcgacaccttcgcggctcgtgctgggtcagaagagctaccgcgagcacgtggacgac
ttcgagcgcacgctcatcaaggccgcgctggaggagggaggaagcatcgccggggccgcg
cggctgctgcaggtggaccggggtaacctgcaccgccgcatcaaggcgctcggcatcccc
gcagcgtga

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