KEGG   Archangium violaceum: JQX13_25675
Entry
JQX13_25675       CDS       T07137                                 
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
avm  Archangium violaceum
Pathway
avm03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:avm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    JQX13_25675 (mutM)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:avm03400]
    JQX13_25675 (mutM)
Enzymes [BR:avm01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     JQX13_25675 (mutM)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     JQX13_25675 (mutM)
DNA repair and recombination proteins [BR:avm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     JQX13_25675 (mutM)
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS NFACT_N RNHCP DUF7573
Other DBs
NCBI-ProteinID: QRK13115
LinkDB
Position
5985126..5985983
AA seq 285 aa
MPELPEVEIARRNLVHWLDGRRVVRAEADDSRVFRGARREDFASLQGRLVSLERRGKYLL
FTFEGGRGLLAHLGMTGRFVRRPEGAVVPYSRARFHLDSGDVIHFADSRLFGRMEPCAAS
RLHALEAVKVLGRDPLADGLTAEQLQEAVGDSRQELKVALMDQGRVTGLGNIHAAEALYR
AGLHPARKPATLTPDEWRRLADAIHASITFGLEEQQGEEPAYLEDGAENRFLIYGRAGTP
CARCGATVESFTQGGRTTHCCPQCQPKNPGRKPPDGRGKRGARRR
NT seq 858 nt   +upstreamnt  +downstreamnt
atgcccgagcttcccgaagtcgaaatcgcccggcgcaacctcgtccattggctggacggt
cgccgcgtcgtgcgcgccgaggccgatgactcccgcgtcttccgcggcgcccgcagggag
gacttcgcctcgctccagggccgcctggtgtcgttggagcgacgcggcaagtacctcctc
ttcaccttcgagggcggccggggtctgctggcccacctgggcatgacgggccgcttcgtc
cgtcggcccgagggggccgtggtgccctacagccgggcccgcttccacctggactccggg
gacgtcatccacttcgccgactcgcgcctcttcggccggatggagccctgtgccgcctcg
cggctgcacgcgctggaggccgtgaaggtgctggggagggatccgctcgccgatggtctc
accgccgaacaactccaggaggccgtgggagactcccgccaggagctcaaggtggcgctg
atggatcaggggcgcgtgacggggctgggcaacatccatgccgccgaggcgctctaccgg
gccggcctccaccccgcgcgcaagcccgcgaccctcacccccgacgagtggcggcggctg
gccgacgccatccacgcctccatcaccttcggcctcgaggagcagcagggcgaggagccc
gcgtacctggaggacggcgcggagaaccgtttcctcatctacggtcgcgccgggacgccc
tgtgcccgatgcggagcgacggtggaatccttcacccaaggaggccgcaccacccattgc
tgcccccaatgccaaccgaagaaccctggccgtaaacccccggacggacgtgggaagcgg
ggtgctcgccgtcgttga

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