KEGG   Archangium violaceum: JQX13_26560
Entry
JQX13_26560       CDS       T07137                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
avm  Archangium violaceum
Pathway
avm03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:avm00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    JQX13_26560 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:avm02044]
    JQX13_26560 (tssM)
Secretion system [BR:avm02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   JQX13_26560 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical AAA_16 DUF6042 Rad17 Phage_holin_3_6
Other DBs
NCBI-ProteinID: QRK13279
LinkDB
Position
complement(6193052..6196681)
AA seq 1209 aa
MIWALVITFLVGLAWGAVAMLGAPPILTGLITAGVFLLFALCKWIVGKIKSRKAAKKLEG
ALEAQAEEQVKTVRPDLQPEIKAMQAEFSKAVEALKTSKLSRGRKDALAVLPWYLIVGPP
GAGKSTALRNSGLKFPYLSAKGGGVRGVGGTRNCDWWLTNEAVILDTAGRYVSSEDDKPE
WFAFLDTLTKYRPKRPINGLIVAVSVSELMGVDPQVAGELGQSIRERLDEITSRLRTLVP
VYLMVTKCDLLPGFTEMYADLTRSERGQIWGFTVPMGAQAEASTDLLLERFDELVNVLEQ
RTVKRLGQERRLEARENIYQFPQRFAELRKNLAEFVQPLFLDNVYQDTPVMRGLYFTSGT
QEVKPMERLSGSSGELFGDSRPQPEPSAEGRSYFLWDIFTKVMFQDQEMAARSSIEEQRY
RRRQLILTATYFTAAALLLVLPIISYFQNRTLARDVRDAITAVRLDDRDDLSRITDLTPL
QAQLQELTKHKTEGAPFWLRFGLYEGDKLFPLAQSFYNTALRRVLLGNQYERIEQNLNLF
AQNQDSPDWKPGSDDYARHFDALKMYLLITWPHTPREPALDDAHQDWLVDQMVRHWTHVK
GSGGEANLQQAITRHARTYIQMLAAEPEQLAFARNNNIVRATRRALNRVPVTTLEMDRIV
SDVSREYPDQTLDDIVGAVPAMRATKRVRGAFTKVAWDQVVRSRLESAFKNKEAWVLDRD
AKEDEEQSRAELRTRYYQQYIQEWKDFLQSITVRPPDNVDQMQALLESLTRGKPPAFGKL
FRALSYNVQLVRTPKQEEKSAARRALEQVFSNEKKDEPRLIDPNASTGEYTLGPRDVEKE
FATLIKFTTEESRSEDGEEKLTALDFYQDQLALVLISLLGVKEKPSESGALLEKIKTTRE
SVAMLVKKYESGGPILEKLLLPPFQDMRSIVFAGVAQTKSNDWCEAVTKPFAQLMANRYP
FVRESMQDAPLAELSEFLRPSGGTLRKFIQQNLADEVVTSGRKWTFANLNTRDMYREDLL
TFLEKSNNLAITLFPGDTVDPLVRFQVRVRAGTSPDTSPSEISAITLTIDGTDEMYRNGP
DNIWKPMSWPGQAGKLGAHIHVENASGATADIDEPGEWGLFRLLERVKRIEPSGDGRFFT
AVWEIEDMNGALVAIDFRPERTANPFFGLSGNNTSRLLQIFRDPGLTPPNGIARGGKGCI
EMVSTNGAP
NT seq 3630 nt   +upstreamnt  +downstreamnt
atgatctgggcactcgtcatcacgttcctggtgggactggcctggggcgcggtcgccatg
ctgggagctccgccgatcctcacggggctcatcaccgcgggcgtgttcctgctgttcgcg
ctctgcaagtggatcgtcgggaagatcaagtcgcgcaaggcggccaagaagctcgagggc
gcgctggaggcgcaggccgaggagcaggtcaagacggtccggccggacctgcagccggag
atcaaggccatgcaggccgagttctccaaggcggtggaggcgctcaagacctccaagctg
tcgcggggccgcaaggatgcgctcgcggtgctgccctggtacctcatcgtcggaccgccg
ggcgcgggcaagagcaccgcgctgcgcaactcgggtctgaagttcccctacctctccgcc
aagggtggcggcgtacgaggtgtgggcggcacgcgcaactgcgattggtggctcacgaac
gaagccgtcatcctcgacaccgccggccgctacgtgagcagcgaggacgacaagcccgag
tggttcgccttcctcgacacgctgacgaagtaccgcccgaagcggcccatcaacggcctc
atcgtggcggtgagcgtcagcgagctgatgggggtggatccccaggtcgccggcgagctg
gggcagagcatccgcgagcgcctggatgagatcacctcgcgtctgcgcacgctggtgccc
gtgtacctgatggtcaccaagtgtgatctcctccccggcttcacggagatgtacgcggac
ctgacgcgctccgagcgcgggcagatctggggcttcaccgtgcccatgggcgcccaggcg
gaggcgtccacggacctgctgctggagcgcttcgacgagctggtgaacgtgctggagcag
cgcacggtcaagcggctgggccaggagcgccggctggaggcgcgcgagaacatctaccag
ttcccgcagcgcttcgccgagctgcgcaagaacctggccgagttcgtccagccgctcttc
ctggacaacgtgtaccaggacacgccggtgatgcgcgggttgtacttcaccagcggaacc
caggaggtcaagccgatggagcggctgtcgggctcctcgggggagctcttcggggactcg
cgtccgcagcccgagccgagcgcggagggccgcagctacttcctgtgggacatcttcacc
aaggtgatgttccaggaccaggagatggccgcccgcagctccatcgaggagcagcgctac
cgccgccgtcagctgatactcacggccacctacttcaccgccgcggccctgctgctggtg
ctccccatcatctcctacttccagaaccggacgttggcgcgcgacgtgcgcgatgccatc
accgccgtgcgtctggatgaccgggacgacctctcgcgcatcacggacctgaccccgctg
caggcccagctccaggagttgacgaagcacaagacggagggagcccccttctggttgcgc
ttcggtctgtacgagggtgacaagctcttcccgctggcgcagtccttctacaacaccgcc
ctgcgccgggtgctgctcggcaaccagtacgagcgcatcgagcagaacctcaacctgttc
gcgcagaaccaggactcgccggactggaagcccggctccgatgactacgcgcgccacttc
gatgcgctgaagatgtacctgctcattacctggccgcacacgccgcgtgagccggcgctc
gacgacgcccaccaggactggctggtggaccagatggtccgtcactggacccacgtgaag
ggctcgggcggagaggccaacctgcagcaggccatcacccgccacgcccgcacgtacatc
cagatgctggcggcggagccggagcagctcgccttcgcgcgcaacaacaacatcgtgcgt
gccacgcgcagagcgctcaaccgcgtccccgtgaccacgctggagatggatcgcatcgtc
tccgacgtgagccgcgagtacccggaccagacgctggatgacatcgtcggcgccgtgccc
gccatgcgcgccaccaagcgcgtccgcggtgccttcaccaaggtcgcgtgggatcaggtg
gtgcgctcgcggctggagtccgccttcaagaacaaggaagcctgggtgctggaccgggac
gccaaggaagacgaggagcagtcccgcgccgagctgcgcacgcgctactaccaacagtac
atccaggagtggaaggacttcctccagtccatcaccgtccggccgccggataacgtggac
cagatgcaggcgctgctcgagagcctcacgcgtggcaagccgcccgccttcggcaagctg
ttccgggcgctctcctacaacgtgcaattggtacgcacgccgaagcaggaggagaagagc
gcggcccgcagggccctcgagcaggtcttctccaacgagaagaaggacgagccgaggctc
atcgacccgaatgcgtccacgggtgagtacacgctcgggccccgcgacgtggagaaggag
ttcgccaccctcatcaagttcaccaccgaggagtcgcgctccgaggacggcgaggagaag
ctgacggcgctcgacttctaccaggaccagctcgcgttggtgctcatctccctgctgggc
gtgaaggagaagccctcggagtccggcgccctgctcgagaagatcaagaccacgcgcgag
agcgtggccatgctcgtcaagaagtacgagagcggcggacccatcctggagaagctgctg
ctgccgcccttccaggacatgcgctccatcgtcttcgccggcgtggcgcagaccaagagc
aacgattggtgcgaggccgtcaccaagcccttcgcccagctcatggccaaccgctatccg
ttcgtgcgcgagtcgatgcaggacgcccccctggcggagctctcggagttcctgcggccc
tcgggaggcacgctgcgcaagttcatccagcagaacctggccgacgaggtcgtcacctcc
ggccgcaagtggacgttcgccaacctcaacacgcgcgacatgtaccgcgaggacctgctc
accttcctggagaagtccaacaacctggccatcaccctcttcccgggtgacaccgtggat
ccgctcgtccgcttccaggtgcgcgtgcgcgcgggcacgtcgccggacacctcgccgtcc
gagatctccgccatcaccctgacgatcgacggcaccgacgagatgtaccgcaacggtccg
gacaacatctggaagccgatgagctggcccggccaggccggaaagctgggcgcgcacatc
cacgtggagaacgcctccggtgccaccgcggacatcgatgagcccggcgagtggggcctg
ttccgcctgctcgagcgcgtgaagcgcatcgagcccagcggagacggccgcttcttcacc
gccgtctgggagatcgaggacatgaacggggcgctcgtcgccatcgacttccgccccgag
cgcaccgccaacccgttcttcggtctgtctggcaacaacacctctcgactgctgcagatc
ttccgggatccgggcctgacgcccccgaacggcatcgcccggggtggcaagggttgcatc
gagatggtgagcaccaacggagctccttga

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