Archangium violaceum: JQX13_26580
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Entry
JQX13_26580 CDS
T07137
Name
(GenBank) thrombospondin type 3 repeat-containing protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
avm
Archangium violaceum
Brite
KEGG Orthology (KO) [BR:
avm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avm02000
]
JQX13_26580
Transporters [BR:
avm02000
]
Other transporters
Pores ion channels [TC:
1
]
JQX13_26580
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
TSP_3
Motif
Other DBs
NCBI-ProteinID:
QRK13283
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Position
6199722..6201536
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AA seq
604 aa
AA seq
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MGRRILAPGALALLLLLPGVAAFAQTTPIKSFDLERLELNPGAEGSLVVGTGELLQAGQF
RISATAHYSHRPLMLFREGKATGVVPGRSTMHLSAAYSLTNRLQVEGQLPLVVLQQWGPS
APNPDGPSSFLLGTPTVGLRLGLLTQDDQGGVDVAVGGDVGLPVGNKDAYARDDGLRYSP
RVMVGRRFGFLRAALDAGVLVRPAVRVTDANADVLDKLGNELRIGAALVTTGRRMRWEFN
VRGMVPLTEQPGSVELMPGVRYLVNPSMEVFALAGIGVGKSPGTPLFRVLAGGSFGDVTP
RRGPGESSVKCDMGLSLAPEECPDSDYDGDSVRNVDDKCPTVPGDPARAGCPRTDLDKDG
IEDSLDACPTEFGPAASQGCPARDQDKDGVEDELDSCPAEAGPADNRGCPLRDRDKDGIE
NDQDECPDEPGPVERKGCPEEDSDKDGTPNRVDSCANQPGTEGNLGCPEHEVPLVEISPT
ELKLRGKVYFEASQSRIQQRSFSVLDWVAKVMREHPEIPQVVVGAHTDDRGFADENRRLS
QRRAEEVMRYLIGKGVAAERLDARGYGPDRPIDSNATSIGRENNRRVDFKIVRDGGESSE
APRK
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgggaagaaggattctcgcgcctggcgcactggcgctgttgctgctgttgcctggagtg
gcggccttcgcgcagacgactccaatcaagtcgttcgacctggagcgtctggaactcaat
cccggagctgaaggctcgctcgtcgtgggcacgggagagttgctgcaggccgggcagttc
cgcatctccgcgacagcccactactcgcaccggccgttgatgttgttccgggaggggaag
gccaccggggtcgtgccgggtcggagcacgatgcacctgtccgccgcctactccctgacg
aacaggttgcaggtggagggacagctgccgttggtggtgttgcagcaatggggaccgagt
gctccgaatccagatgggccaagctccttcctgctggggacgcccacggtagggctgcgc
ctgggtctgctcacgcaggacgatcagggcggggtcgatgtggcggtggggggtgatgtc
gggctgccagtgggcaacaaggatgcgtacgcgcgggatgatgggctgcgttactcgccg
cgggtgatggtgggccggcgctttggtttcctgcgggcggccttggacgcgggagtgctg
gttcgcccagcggtgcgcgtcaccgatgccaacgccgatgtcctggataaactgggcaat
gagctgcgcattggggcggcgctggtgacgacggggcgccggatgcggtgggagttcaat
gtccgaggcatggttcctcttacggagcagccgggctcggtggaactgatgccgggagtg
cgctacctggtgaacccctcgatggaggtgttcgcgctggcgggcatcggggtcggcaag
agtccagggacgccactgttccgggtgctcgcgggaggttctttcggagacgtgacgccg
cggcgagggccgggggagtcctccgtcaagtgcgacatgggactgtccctggctccggag
gagtgcccggacagtgactacgacggcgacagtgtgcgcaacgtcgatgacaagtgcccg
accgtgccgggcgatcccgcgcgtgcgggctgcccacggacggacctggacaaggatggc
atcgaggactcgctggacgcctgtccgacggagtttggccctgccgcgagccagggctgt
cccgcgcgtgatcaggacaaggacggcgtcgaggacgaactggacagttgcccggcggag
gcgggtcccgcggacaaccggggctgcccgctcagggaccgcgacaaggacggaatcgag
aacgaccaggacgagtgtcccgacgagcccggtccggtcgagcgcaagggctgcccggag
gaggactcggacaaggacggcacgcccaaccgggtggatagctgtgccaaccaaccgggt
acggagggcaacctgggttgtcccgagcatgaagtgcccctggtggagatctcgcccacg
gagctcaagttgcgcggcaaggtgtacttcgaggcgtctcagtcgcgcatccagcagcgc
tccttctcggtgctggattgggtggcgaaggtgatgcgcgagcacccggagattccgcag
gtggtggtgggtgctcacacggatgaccggggcttcgcggacgagaaccgccggctgtcg
cagcggcgcgccgaagaggtgatgcgctacctcatcgggaagggcgtggccgccgagcgg
ctggatgccaggggttacggtccggacaggcccatcgacagcaacgcgacatcgattggc
cgtgagaacaaccggcgggtggacttcaagatcgtccgcgacggcggcgagagctcggag
gccccccggaagtag
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