Archangium violaceum: JQX13_27270
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Entry
JQX13_27270 CDS
T07137
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
avm
Archangium violaceum
Pathway
avm02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
avm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JQX13_27270
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
avm02022
]
JQX13_27270
02035 Bacterial motility proteins [BR:
avm02035
]
JQX13_27270
Two-component system [BR:
avm02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
JQX13_27270
Bacterial motility proteins [BR:
avm02035
]
Pilus system
Twitching motility proteins
JQX13_27270
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA
Mg_chelatase
AAA_16
Parvo_NS1
nSTAND6
AAA_3
MCM
nSTAND3
ATPase
DUF2773
Torsin
bpMoxR
AAA_7
Motif
Other DBs
NCBI-ProteinID:
QRK03986
LinkDB
All DBs
Position
6376410..6377906
Genome browser
AA seq
498 aa
AA seq
DB search
MVATSACPRLRKRAPSSSSNCRCRVEGEREGLVVHILVVDDELSMREFLEVLLTRAGYQV
TCVDGVRAAREVLGSARVDLVVTDMRLGASQSGMDVLRATRSLPEPPEVIVITAFGTAAS
AVEAMREGAYDYIGKPFDNEELKLLVQKALEKRTLRRENVSLREHLVPGAGVMGVGRSER
MRAVWSLVEKVAPTRSTVLIHGESGTGKELIAKAIHLKSTRAGQPFLPVNCAALNEGVLE
SELFGHVKGAFTGATQERPGLLVHAGEGTVFLDEIGEVPLATQVKLLRVLQERKVKPVGS
SAEIPFHARVVAATNRRLEAEVKAGRFREDLFYRLNVITLELPPLRERAGDIPLLAEHFL
ERQRKELGRPGLRFSPEALAVLASYPFPGNVRQLENIVERAATLADGDVLTLASLPPTLR
GEPAQPAAVSASPSEQVSLGTGFSLEHFLDDAERRYLVAALTQAGGVKTRAAELLGLTFR
SFRYRMAKHGLSDRDDEA
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggtggcaacatccgcgtgtcctcgtctccgaaagagggcaccgagttcctcatccaac
tgccgctgcagggttgagggggaaagggagggcctggtcgtgcacatcctggtggtggac
gatgagctgtcgatgcgcgagttcctggaggtgctgctcacccgggcgggctaccaggtg
acgtgcgtggatggcgtgcgggcggccagggaggtcctgggctcggcgcgggtggacctg
gtcgtcaccgacatgcggttgggcgcctcgcagagtggcatggacgtgctgcgtgccacg
cggtccctccccgagccgcccgaggtcatcgtcatcaccgccttcggcacggcggcctcg
gcggtggaggccatgcgcgaaggggcgtacgactacattggcaagcccttcgacaacgag
gagctgaagctgctggtgcagaaggcgctggagaagcgcacgctgcgccgggagaacgtc
tcgctgcgcgagcacctggtgccgggcgcgggagtaatgggggtgggccgcagcgagcgg
atgcgcgcggtgtggagcctggtggagaaggtggcgcccacgcgctccaccgtcctcatc
catggagagagcggtacgggcaaggagctcatcgccaaggccatccacctcaagagcacg
cgtgccggccagcccttcctccccgtcaactgcgcggccctcaacgagggcgtgctggag
agcgagctcttcggtcacgtgaagggggccttcaccggcgccacgcaggagcggccgggt
ctgctcgtgcatgcgggggaggggacggtgttcctcgacgagattggcgaggtgccgctg
gccacgcaggtgaagctgctgcgcgtgctgcaggagcggaaggtgaagcccgtgggcagc
tcggcggagatccccttccatgcgcgggtggtggcggccaccaaccggcgtctggaggcc
gaggtgaaggcggggcgcttccgggaagatctcttctaccgcctcaacgtcatcaccctg
gaactgccccccctgcgcgagcgggcgggcgacattccgctgctggccgagcacttcctc
gagcggcagcgcaaggagctggggcggccggggttgcgcttctctccagaggcgctggcg
gtgctggcctcctatcccttccctggcaatgtgcgccagctggagaacatcgtcgagcgc
gcggccacgctggcggatggagacgtgctgacgctggcctcgctgccccccacgctgcgg
ggcgagccggcacagcccgccgccgtctccgcctctccctcggagcaggtctcgcttggg
accggcttttccctggagcacttcctggatgatgccgagcggcgctacctggtggccgcc
ctgacccaggcgggtggggtgaagacgcgtgcggcggagttgctcggcctgacgttccgt
tccttccgctaccgcatggccaagcacgggctctccgaccgggacgacgaggcttga
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