Archangium violaceum: JQX13_27775
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Entry
JQX13_27775 CDS
T07137
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
avm
Archangium violaceum
Brite
KEGG Orthology (KO) [BR:
avm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
avm01011
]
JQX13_27775
Enzymes [BR:
avm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
JQX13_27775
Peptidoglycan biosynthesis and degradation proteins [BR:
avm01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
JQX13_27775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM_RLK
LysM1_NFP_LYK
LysM3_NFP
LonC_helical
SLT_2
Herpes_ORF11
Motif
Other DBs
NCBI-ProteinID:
QRK04077
LinkDB
All DBs
Position
complement(6494755..6496749)
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AA seq
664 aa
AA seq
DB search
MPPFSLLLLVLASVPPSRDAVPTPSVPPAMRAPGAEDKPMRVAGAAQEPAVPIQSAEEIL
KDLANEPTEDAGAAEEDEASEESTELEELRALEGATLDPGARPNAEVLQSLRRLGMANPL
RLRMLDALEEPTFREDEETGELPLMTDLSNFDVSRVQARYDIPVEMQPLVAQYIQFFQGP
GRKWFSKWVSRSTRYLPVMQPILEAHGLPRDTVYLAMIESGFSPTAYSWAHASGPWQFIA
STGRQYGLRQDFWVDERRDPIKATYAAARYLKDLYAELGHWYLAWAGYNTGSGRVRRLME
RLGTNDFWAISSPAEKGLALETRHYVPKLIAAALIAKHPAAFGFSEQEFVYEQPLTFDEV
KLTDATDLDVIARAAGVSVAQIQDLNPELRRWCTPPATAKNPYVLRLPKGSAQQFAENFA
RLSPKERLTFRVHKVKRGDTLSQIALTYGTAPEAILQMNRLKSVRTLRVNAELVIPVPAV
RGGGKPAGGASALARKVAQARRSGVSVLRPEDEVPAGTPRGPVATGPIKTETINGRKRVT
YGVQSGDSLWAIAQRFQVNVDDIRKWNNLTVRASKKALKVGSVLYLWPDNAPKQVEERAG
TVIAQRAPAGNAGRPSGVHELAAGESLWSVAQRYGVSVEDIKRWNNIKDTTRLPTGLRLV
VKAP
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccttcagcctgctcctcctggttctcgcctccgtcccgccgtccagggacgcg
gtgccgacgccctcggtcccccccgccatgcgggcgcccggcgccgaagacaagccgatg
cgcgtagcgggcgccgcccaggagcccgcggtccccatccaatccgccgaggagatcctc
aaggatctggcgaacgagcccaccgaggacgccggggccgccgaggaggacgaggcctcg
gaggagtccaccgagctcgaggagctgcgggccctggagggggccacgttggatcccggc
gcccggcccaacgccgaggtgctccagtcgctgcgccgcctgggcatggccaacccgctg
cgcctgcgcatgctggacgcgctggaggagcccaccttccgcgaggacgaggagaccggc
gagctgccgctcatgacggacctctccaacttcgacgtctcgcgggtgcaggcccgctac
gacatcccggtggagatgcagccgctggtggcccagtacatccagttcttccaggggccg
ggccgcaagtggttcagcaagtgggtgagccgttccacgcgctacctgccggtgatgcag
cccatcctcgaggcccacgggctgcctcgtgacacggtgtacctggcgatgatcgagagc
ggcttctcccccaccgcctactcgtgggcgcacgcctccggaccctggcagttcatcgcc
agcaccggccgccagtacgggctgcgccaggacttctgggtggacgagcgcagggatccc
atcaaggccacctacgccgccgcgcgctacctgaaggacctctacgccgagctgggccac
tggtacctggcgtgggcgggctacaacacgggcagcggccgggtgcggcggttgatggag
cggctgggcacgaacgacttctgggccatctcctcccccgcggagaagggactggcgctg
gagacgcggcactacgtgcccaagctcatcgccgcggcgctcatcgccaagcaccccgcg
gccttcggcttctccgagcaggagttcgtctacgagcagcccctcaccttcgacgaggtg
aagctcaccgacgccaccgacctggatgtcatcgcccgggcggccggcgtgtccgtggcg
cagatccaggacctcaaccccgagctgcggcgctggtgcaccccgcccgcgaccgcgaag
aacccctacgtcctgcgcctgcccaagggctcggcccagcagttcgcggagaacttcgcg
cgcctgtcacccaaggagcggctcaccttccgcgtccacaaggtgaagcgaggcgacacg
ctgtcgcagatcgccctcacctacggcacggcccccgaggccatcctgcagatgaaccgg
ctcaagagcgtgcgaacgctgagggtgaacgcggagctggtgattcccgtgccagccgtg
cgcggtggaggcaaaccggccggtggagcgagcgcgctggcccgcaaggtggcgcaggcg
cggcgcagcggcgtgtcggtgctgcgccccgaggacgaggtgcctgcggggacgccgcgc
ggtccggtggccaccggccccatcaagacggagaccatcaacggccgcaagcgcgtcacc
tacggcgtgcagtcgggtgacagcctgtgggccatcgcccagcgcttccaggtgaacgtg
gacgacatccggaagtggaacaacctgacggtgcgcgccagcaagaaggccctgaaggtg
ggctccgtgctctacttgtggccggacaacgcccccaagcaggtggaggagcgcgcgggc
accgtcatcgcccagcgcgcccccgccggcaacgcgggccgccccagcggcgtgcacgag
ctggccgcgggagagtcgctgtggagcgtcgcccagcgctacggcgtgtccgtcgaggac
atcaagcgctggaacaacatcaaggacacgactcgcttgcccaccggcctgcggctggtg
gtgaaggcgccgtag
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