Archangium violaceum: JQX13_28010
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Entry
JQX13_28010 CDS
T07137
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
avm
Archangium violaceum
Brite
KEGG Orthology (KO) [BR:
avm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
avm03019
]
JQX13_28010
03009 Ribosome biogenesis [BR:
avm03009
]
JQX13_28010
Messenger RNA biogenesis [BR:
avm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
JQX13_28010
Ribosome biogenesis [BR:
avm03009
]
Prokaryotic type
rRNA processing factors
JQX13_28010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
QRK04117
LinkDB
All DBs
Position
complement(6540510..6543191)
Genome browser
AA seq
893 aa
AA seq
DB search
MSSILVINAAGRETRVALVEGGHIAEFYLERKKDKGIVGNIYKGRVVRVLPGMQAAFVDI
GLEKAAFLYVSDVVYDPDFARAQFELTEGEHDEDTPDVPEESEAEAAEAAHEADGAEVEA
EVHEQQAPGGGETPHPVEEPAPRVEEPRAEQPERRAEEPAPQAEQPERRAEEPAPQAEQP
ERRAEEPAPTVSTAAEPVSVSAPSEAVSVPVVPVAPVESAPVSVAAQAAPEASAAMPSTE
GSVALALPPEPAPITQSEPAPVAPPAQAEAAPQQRPETAAGERRAPRENREAAREAREAR
RDQKDRGEREKDREKDKSRKQREEQQRKRDEDKSKPRKTAKIEELLKVGQEVVVQISKDP
IGTKGARLTSHISIPGRHLVFMPTVDHVGISRRISNEKERKRLREIVDRLRPPGTGFIVR
TVAENVPQEKLESDIRFLIEVWNQVVRRNEKRGGSGLLHPDLDLILRATRDLFAHDVEKL
VVDDREEYERILGFVNAQDPALKDRVVLHDSDEPIFDAYGIEHELQRATQRKVWLKSGGY
LIIDQAEALTAIDVNSGRYVGKKSLEETITKINVEAAKEIVYQLRLRNIGGIIICDFIDM
EKPQNRDKVFKSLQEALGRDKAKTNVLKISELGLVEMTRKRVRESIGRILHEDCPYCDGK
GFVKTATTVAYEIFGEIRREAPGYKDPTLVINCNAEVARLLQGEERQELRHLMDRYNKSI
QVKAQQNYHREQYDIYGRSAQGGDHKVASSPGSGDGELSMQRRPESGGGERGFRSEGGGR
DRDRGGERGDRGGRDRERGGRDRDRDRDRGGERGERGGRDRGGERGERGDRSERGDRGGR
DRDRNRGEQRRPEQREGRGQQAQQQQATAGEQAPSGGTPPTSSGGNNESGGNS
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcatcctcgtcatcaacgcggcgggccgggagacccgcgtggccctggtcgaa
ggcggccacatcgcggagttctacctcgagcgtaagaaggacaaggggatcgtcggaaac
atctacaagggccgcgtcgtccgggtgctcccggggatgcaggcggccttcgtggacatc
ggactcgagaaggccgcgttcctctacgtcagtgacgtcgtctacgacccggacttcgcg
cgcgcccagttcgagctgaccgagggcgagcacgacgaggacaccccggacgtccccgag
gagtccgaggccgaggccgccgaggccgcccatgaggccgacggtgccgaggtggaggcg
gaggtccacgagcagcaggcccctggaggcggcgagacgccccaccccgtcgaggagccc
gcgccacgcgtcgaggagccccgagccgagcagccggagcgccgcgccgaggagcccgcg
ccccaggccgaacagccggagcgtcgcgccgaggagcccgcgccccaggccgaacaaccg
gagcgtcgcgccgaggagcccgcccccactgtctccaccgcagccgagccggtgtcggtg
tccgccccgtccgaggcggtgagcgtccccgtggtgccggtggcgcccgtggagtccgct
cccgtgagcgtggcggcccaggcggcgccggaagcctccgcggcgatgccctccaccgag
ggttcggtggccctggcgctcccgcccgagccggctcccatcacgcagagcgagccggcc
cccgtggcgcctcccgcccaggccgaggccgccccgcagcagcgtcccgagacggccgct
ggcgagcgccgcgccccgcgcgagaaccgcgaggccgcccgtgaggcccgcgaggcccgc
cgcgaccagaaggaccgtggtgagcgcgagaaggatcgggagaaggacaagtcccgcaag
cagcgcgaggagcagcagcgcaagcgcgacgaggacaaatccaagccgcgcaagacggcc
aagatcgaggagttgctgaaggtgggccaggaggtcgtggtccagatctccaaggacccc
atcggcaccaagggcgcgcgcctcacctcgcacatctccatcccgggccgtcacctggtc
ttcatgcccaccgtggaccacgtgggcatcagccgccgcatctccaacgagaaggagcgc
aagcgcctgcgggagattgtcgaccggctgcgcccgcccgggacgggcttcatcgtgcgc
acggtggccgagaacgtgccgcaggagaagctcgagagcgacatccgcttcctcatcgag
gtgtggaaccaggtggtgcgccgcaacgagaagcgcggtggctccggcctgctgcacccg
gacctggacctcatcctgcgcgccacgcgcgacctcttcgcccacgacgtggagaagctg
gtcgtggatgaccgcgaggagtacgagcgcatcctcggcttcgtgaacgcgcaagacccg
gcgctcaaggaccgggtggtgctgcacgactccgatgaacccatcttcgacgcctacggc
atcgagcacgagctgcagcgcgccacccagcgcaaggtgtggctcaagagcggcggctac
ctcatcatcgaccaggccgaggcgctcaccgccatcgacgtcaactcgggccgctacgtc
ggcaagaagagcctcgaggagacgatcaccaagatcaacgtcgaggcggccaaggagatc
gtctaccagctgcggctgcgcaacatcggcggcatcatcatctgcgacttcatcgacatg
gagaagccgcagaaccgggacaaggtcttcaagtcgctgcaggaggctctgggccgggac
aaggccaagacgaacgtcctgaagatctccgagctgggcctggtggagatgacgcgcaag
cgcgtgcgcgagtccatcggccgcatcctccacgaggactgcccgtactgcgacggcaag
ggcttcgtgaagacggcgaccacggtggcctacgaaatcttcggggagatccgccgcgag
gcgccgggctacaaggaccccacgctggtcatcaactgcaacgccgaggtggcgcggctg
ctccagggagaggagcgtcaggagctgcggcacctgatggaccgctacaacaagtccatc
caggtgaaggcgcagcagaactaccaccgcgagcagtacgacatctacggacgcagcgcg
cagggcggagaccacaaggtggcctcgtcgccgggctcgggagatggcgagctgtcgatg
cagcgccggccggagagcggcggtggcgagcgcggcttccgctccgaggggggcggccgt
gaccgcgaccggggcggcgagcggggtgaccggggcggccgagaccgcgagcggggtggc
cgtgaccgcgaccgggaccgggaccggggcggcgagcggggcgaacgaggtggccgggac
cggggcggagagcggggcgagcgaggcgaccggagcgagcgaggcgaccggggtggccga
gaccgcgaccgcaaccggggtgagcagcgtcggcccgagcagcgcgagggacgtggacag
caggcccagcaacagcaggcaacggctggcgagcaggctccatcgggaggcacgcctccg
acgtcgtccggaggcaacaacgagtccggcggcaactcctga
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