Archangium violaceum: JQX13_32775
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Entry
JQX13_32775 CDS
T07137
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
avm
Archangium violaceum
Brite
KEGG Orthology (KO) [BR:
avm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
avm03016
]
JQX13_32775 (truA)
Enzymes [BR:
avm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
JQX13_32775 (truA)
Transfer RNA biogenesis [BR:
avm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JQX13_32775 (truA)
Prokaryotic type
JQX13_32775 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
CATSPERE_NTD1
Motif
Other DBs
NCBI-ProteinID:
QRK04965
LinkDB
All DBs
Position
7655538..7656332
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AA seq
264 aa
AA seq
DB search
MPRLKLTLEYDGTRYVGWQVQPNGVSIQSRLGQALEQLLGERVSVEAAGRTDAGVHATGQ
VVCFDTVRTLPLKAYWMGLNRFLPEDIAVVRAEEVPPDFDPRRWSRGKRYRYRVSNKPSR
SPLRRFTHWEVFAPLDVEALRRAAAHLVGRHDFSSFRASDCQAAHAVREVRRVDVQGTSG
DELSVTVEGTAFLKHMVRNLVGTLVEVGKGRRPELWVAEVLAARDRKRAGPTAPAQGLVL
EEVFYGEGPPPRTPGGTADGEDEE
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgccccggctgaagctgaccctcgaatacgacggcacccggtacgtggggtggcaggtc
cagcccaatggcgtctccatccagtcccggttgggacaggcgttggagcagctgctcggc
gagcgtgtctccgtggaggccgccggacggaccgacgcgggcgtgcatgccaccgggcag
gtggtgtgcttcgacacggtgcgcacgctgcccctcaaggcgtactggatggggctcaac
cgcttcctgcccgaggacatcgccgtcgtccgcgccgaggaggtgccccccgacttcgac
ccgcgccgctggtcccgaggcaagcgctaccggtaccgggtgagcaacaagccctcgcgc
tcgcccctgcgccgcttcacccactgggaggtgttcgcccccctggacgtggaggccctg
cgccgcgccgccgcgcacctggtgggccggcatgacttctcctccttccgggcctcggac
tgtcaggccgcccacgcggtgcgcgaggtgcgccgggtggacgtccagggcacctcgggg
gacgagctctccgtcaccgtcgagggcaccgccttcctcaagcacatggtgcgcaacctc
gtgggcaccctggtggaggtgggcaagggccgccgtcccgagctctgggtggccgaggtc
ctcgccgcgcgcgatcgcaagcgcgccggccccaccgctccggcccaggggctcgtcctg
gaggaggtcttctatggagagggcccgcctcctcgcaccccaggcggtacggcggacggg
gaagacgaggagtga
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integrated database retrieval system
