KEGG   Archangium violaceum: JQX13_33425
Entry
JQX13_33425       CDS       T07137                                 
Name
(GenBank) DotU family type IV/VI secretion system protein
  KO
K11892  type VI secretion system protein ImpK
Organism
avm  Archangium violaceum
Pathway
avm03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:avm00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    JQX13_33425
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:avm02044]
    JQX13_33425
Secretion system [BR:avm02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   JQX13_33425
SSDB
Motif
Pfam: DotU PolyA_pol_RNAbd dNK
Other DBs
NCBI-ProteinID: QRK05084
LinkDB
Position
complement(7786872..7787639)
AA seq 255 aa
MPIPDISPPSSESTPLLDKSRIVFTEILQLRQQLQAISTPTRFNSRFTPGPTVEELRRQL
LHRVQEQTRIEGAPRGSLIERHLEECRYVLTSFADEMMVHTPWYGHEAWRENLLEDELFG
THVAGDRIFEEVERLLRERDPARAEIAAVYLMALALGFQGRYRGLGAEALLQDLQCQLYT
LTWRRRPEPDTPARRLVPQSYEHTRDERTDRRFMRRWPWTTAIAAVLVSAFAAGGILVSS
HAHRSSTSVTQESRP
NT seq 768 nt   +upstreamnt  +downstreamnt
atgccaattccagacatctctcccccctcctccgagagcacgcccctcctcgacaagtcc
cgtatcgtgttcacggagatccttcagctgcgccagcaactccaggccatttccaccccc
acccgcttcaacagcaggttcacaccgggccccaccgtcgaggagctccggcggcaactg
ctccatcgcgttcaggagcagacccgcatcgaaggggccccgcgtggctcgctcatcgag
cgccatctcgaggagtgccgctatgtgctcacctccttcgccgacgagatgatggttcac
acgccctggtacggccatgaagcctggcgggagaacctgctggaggacgagctcttcggc
acccacgtcgccggggaccggatcttcgaggaagtggaacgcttgttgcgcgagagggat
ccggcacgcgcggagatcgcggccgtgtacctgatggcgctcgcactcggcttccagggc
cgctaccgggggctcggggccgaggccttgctgcaggatctgcaatgccagctctacacc
ctgacctggcggcgacgccccgaaccggacacgcccgcccgccggctggtgccccagtcc
tacgaacacacccgggatgagcggacggatcgacgcttcatgcgccgctggccctggacc
accgccatcgccgccgtgctcgtgagtgcgttcgccgccggaggaatcctcgtcagctcg
cacgcccaccgttcttcgacctccgtcacgcaggagtcccgcccatga

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