Archangium violaceum: JQX13_35550
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Entry
JQX13_35550 CDS
T07137
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
avm
Archangium violaceum
Pathway
avm00521
Streptomycin biosynthesis
avm00523
Polyketide sugar unit biosynthesis
avm00541
Biosynthesis of various nucleotide sugars
avm01100
Metabolic pathways
avm01110
Biosynthesis of secondary metabolites
avm01250
Biosynthesis of nucleotide sugars
Module
avm_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
avm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
JQX13_35550 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
JQX13_35550 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
JQX13_35550 (rfbC)
Enzymes [BR:
avm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
JQX13_35550 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Polysacc_synt_C
Motif
Other DBs
NCBI-ProteinID:
QRK05453
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Position
8289942..8290493
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AA seq
183 aa
AA seq
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MNIIQTELPGVLLLEPKRFGDDRGFFMEMFHAKRYAEVGISGPFVQDNFSRSAKGILRGL
HFQEPNAQGKLVQVLVGAVYDVAVDVRRGSPTFGRWVGVELSADNRRQLWVPPGFAHGFC
VLSESADFHYKCTDFYSPTTERGIAWNDPDLGIPWPVTSPLLSPKDAAAPRLKDAPVLPV
YAG
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcatccagacggagttgccaggggtcctcctcctcgagcccaagcgcttcggc
gacgatcgtggcttcttcatggagatgttccatgcgaagcgctacgcggaggtcggcatc
tccgggcccttcgtgcaggacaacttctcgcgctcggcgaaggggatccttcgcggcctg
cacttccaggagccgaacgcgcagggcaagctggttcaggtgctggtgggcgccgtctat
gacgtggcggtggacgtccgccgcggctcgccgacctttggcaggtgggtgggcgtggag
ctgagcgcggacaaccggcgccagttgtgggtgccgccggggttcgcgcacggcttctgc
gtcctctccgagagcgcggacttccattacaagtgcacggacttctactcgcccaccacc
gagcggggcatcgcctggaacgatccggatctgggcatcccctggccggtgacgtcgccg
ctgctgtcgcccaaggacgcggccgcgccgcggctgaaggacgcgccggtgctgcccgtc
tacgcgggttga
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