Archangium violaceum: JQX13_36830
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Entry
JQX13_36830 CDS
T07137
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
avm
Archangium violaceum
Brite
KEGG Orthology (KO) [BR:
avm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avm02000
]
JQX13_36830
Transporters [BR:
avm02000
]
Other transporters
Pores ion channels [TC:
1
]
JQX13_36830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
CarboxypepD_reg
PEGA
DUF748
Motif
Other DBs
NCBI-ProteinID:
QRK05675
LinkDB
All DBs
Position
complement(8661382..8662680)
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AA seq
432 aa
AA seq
DB search
MDSLLKLGLLTGLLSVDAVRAAEPPSVEQVSAELDRELQQMVKSPSPEVRLLFSGLDPSG
YKLVEVHFTLDGKPLEVPPVEKLASPGPHVLTTLQVEDGPHTLVSNVVYMDASWNLFSQT
SGLLWNVTSTLNFQTQRGLRVDVKAMSMLVPEAKDPRQKVKLSHDVTAEMIAKLEDGPPP
PPEPHPEKASVPDAGVVIAPAPTQPEPTRPPGNPEPPPATPAAQPQKAKLLVRATVLRKS
VAATISVRGSTTQKVTLKRGAKAPTPVEVTPGEYTVDVIAPGFLAQTRRVLLSGGNAQPL
EFALVRAPKKKLVKEKNDRLELLKPLRFPQGKAAPLPGGNVLLQQLVDTLVRRPIQRIRI
EGHTDNQEGEESERKQLSEERAKAVAELLVQAGVDPARIETAGLADSRPKAPNITPRGRE
LNRRVELVILER
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
ttggactcgctgctaaagctcggtttgctcacgggactgctctccgttgacgcggtgcgt
gcagcggagccaccgtccgtcgagcaggtgagcgccgagttggaccgggaactccagcag
atggtgaaaagcccatcgccggaggtgcggctgctcttctcgggattggatccctccggg
tacaagctcgtggaggtccacttcaccctcgacggcaagccgctcgaggttccgccggtg
gagaagctcgcctcccccggcccccatgtgctgacgacgctgcaggtggaggacgggccc
cacacgctcgtgtccaacgtcgtctacatggacgcgtcgtggaacctgttcagccagacg
tccggcctgctgtggaacgtgacctccacgctcaacttccagacgcagcgcgggctgcgc
gtggacgtgaaggccatgtccatgctggtgccggaggcgaaggacccgcggcagaaggtc
aagctgtcgcacgatgtgacggcggagatgatcgcgaagctcgaggacggcccgccgccc
cctcccgagccccacccggagaaagcctcggtgccggacgcgggcgtggtgatcgccccg
gctccgacacaaccggagccgacgaggcctccgggcaaccccgagccgccaccggcgacc
ccggcggcccagccgcagaaggcgaagctcctggtccgggcaacggtgctccgcaagtcc
gtggcggcgacgatctccgtgcgcgggagcacgacccagaaggtgacgctgaagcggggg
gccaaggcgcccacgccggtggaggtgactccgggcgaatacacggtggacgtcatcgcc
cccggcttcctcgcgcagacgcgccgggtgctgctctccggaggcaacgcgcaaccgctg
gagttcgcgctggtgcgcgcgccgaagaagaagctcgtgaaggagaagaacgaccggctc
gagctgctcaagcccctgcgcttcccccagggcaaggcggcgccgctgccgggcggcaac
gtcctcctccaacagctcgtggacacgctcgtgcggcgccccatccagcgcatccgcatc
gagggccacaccgacaaccaggagggcgaggagagcgagaggaagcagctctccgaggag
cgggccaaggccgtggcggagctgctcgtgcaggcgggggtggacccggcgcgcatcgag
acggcgggcctcgccgactcccggccgaaggcgcccaacatcaccccgcgcggacgcgag
ctcaaccggcgcgtggagctcgtcatcctcgagcgctga
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